PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSVIVT01021137001
Common NameLOC100243518, VIT_10s0003g00500
Organism
Vitis vinifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Vitis
Family VOZ
Protein Properties Length: 485aa    MW: 53537.1 Da    PI: 5.6617
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSVIVT01021137001genomeGenoscopeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ441.51e-1352094242217
                VOZ   2 ppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaa 93 
                        ppsaflgpkcalwdc+rpaqg++w+q+ycssfhatlal eg+pg+tpvlrp+gi+lkdgllfaalsakvqgk+vgipecegaatakspwna+
  GSVIVT01021137001 209 PPSAFLGPKCALWDCPRPAQGMDWCQNYCSSFHATLALSEGPPGMTPVLRPGGIGLKDGLLFAALSAKVQGKDVGIPECEGAATAKSPWNAP 300
                        7******************************************************************************************* PP

                VOZ  94 elfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrl 185
                        elfdls+legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm+e+gglkrsyymdpqp+++fewhlyeyei+++da+alyrl
  GSVIVT01021137001 301 ELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEYGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRL 392
                        ******************************************************************************************** PP

                VOZ 186 elklvdekksakgkvskdsladlqkklgrlta 217
                        elklvd+kks+k+k ++ds+adlqk++grlta
  GSVIVT01021137001 393 ELKLVDGKKSSKAKATTDSVADLQKQMGRLTA 424
                        ******************************97 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009408Biological Processresponse to heat
GO:0009414Biological Processresponse to water deprivation
GO:0009631Biological Processcold acclimation
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048578Biological Processpositive regulation of long-day photoperiodism, flowering
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    Send to blast
MGKGSKSNCK SASHKMFKDK AKNRVDDLQG MFTDLQSARK ESRSVDVAVL EEQLHQMLRE  60
WKAELNEPSP ASSLQGGSLG SFSSDICRLL QLCEEEDDAT SALADGAVPK PEPDAQGHQI  120
GASVLFQERY NKGPQEHGFQ LVDQCKISPS GAHNMGVHNL EGATQLDYRQ FDLQQDFEQN  180
FFAGYDGTGL CGEDAMPHIS SFLPSICLPP SAFLGPKCAL WDCPRPAQGM DWCQNYCSSF  240
HATLALSEGP PGMTPVLRPG GIGLKDGLLF AALSAKVQGK DVGIPECEGA ATAKSPWNAP  300
ELFDLSVLEG ETIREWLFFD KPRRAFESGN RKQRSLPDYS GRGWHESRKQ VMNEYGGLKR  360
SYYMDPQPLN HFEWHLYEYE ISKCDACALY RLELKLVDGK KSSKAKATTD SVADLQKQMG  420
RLTAEFPLDN KRSVKGRTKI NMKDGVGDVY STPNRVGPPN QQGDYGVGGP YDYLVENLGD  480
YYLT*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Vvi.70550.0flower| fruit| leaf
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFQ3937890.0FQ393789.1 Vitis vinifera clone SS0AFA24YC24.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002273268.10.0PREDICTED: transcription factor VOZ1
SwissprotQ9SGQ00.0VOZ1_ARATH; Transcription factor VOZ1
TrEMBLF6HM510.0F6HM51_VITVI; Uncharacterized protein
STRINGVIT_10s0003g00500.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP23271335
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.20.0vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]