PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Gh_A01G1105

Organism

Gossypium hirsutum

Taxonomic ID

3635

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium

Family

bZIP

Protein Properties

Length: 104aa MW: 11893.7 Da PI: 10.6635

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Gh_A01G1105	genome	NAU-NBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.5	8e-10	44	98	1	56
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 e+e k+ + k+kNR++A +sR+R ++ + eekv++L +eN aL k+l +l+ + Gh_A01G1105 44 EAEQKKRKNKIKNRISAAKSRARSQEHTRFPEEKVEQLRNEN-ALLKKLLSLEAAA 98 67899*************************************.5777888887665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	7.6E-10	40	92	No hit	No description
Pfam	PF00170	4.8E-7	44	93	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.979	46	90	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.25E-7	48	93	No hit	No description
PROSITE pattern	PS00036	0	51	66	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 104 aa Download sequence Send to blast
MLEKRSRMQV LAADAPSGSG ELLIMNDLPV YKRGRNKIQE AIEEAEQKKR KNKIKNRISA 60 AKSRARSQEH TRFPEEKVEQ LRNENALLKK LLSLEAAAAE RLPE

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Ghi.15239	1e-101	boll

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016738262.1	4e-61	PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5-like isoform X1
Refseq	XP_016740020.1	4e-61	PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5-like isoform X1
Refseq	XP_016740027.1	4e-61	PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5-like isoform X1
Refseq	XP_016742794.1	4e-61	PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5-like
TrEMBL	A0A2P5XLT7	1e-64	A0A2P5XLT7_GOSBA; Uncharacterized protein
STRING	Gorai.009G085700.1	1e-45	(Gossypium raimondii)