PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A02G0666
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family G2-like
Protein Properties Length: 752aa    MW: 84408.5 Da    PI: 7.8855
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A02G0666genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like37.36e-126867132552
      G2-like  25 ekAtPktilelmkvkgLtlehvkSHLQk 52 
                   +AtPktil+lm+++gL l+hvkSHLQk
  Gh_A02G0666 686 SEATPKTILDLMDLDGLNLYHVKSHLQK 713
                  57*************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.630.108.8E-10215472IPR001128Cytochrome P450
SuperFamilySSF482642.23E-10332473IPR001128Cytochrome P450
PfamPF000679.2E-7637458IPR001128Cytochrome P450
PRINTSPR004631.2E-226887IPR002401Cytochrome P450, E-class, group I
PRINTSPR004631.2E-22279296IPR002401Cytochrome P450, E-class, group I
PRINTSPR003854.1E-9290307IPR001128Cytochrome P450
PRINTSPR004631.2E-22299325IPR002401Cytochrome P450, E-class, group I
PRINTSPR004631.2E-22345363IPR002401Cytochrome P450, E-class, group I
PRINTSPR003854.1E-9346357IPR001128Cytochrome P450
PRINTSPR004631.2E-22385409IPR002401Cytochrome P450, E-class, group I
PRINTSPR004631.2E-22416426IPR002401Cytochrome P450, E-class, group I
PRINTSPR003854.1E-9417426IPR001128Cytochrome P450
PROSITE patternPS000860419428IPR017972Cytochrome P450, conserved site
PRINTSPR004631.2E-22426449IPR002401Cytochrome P450, E-class, group I
PRINTSPR003854.1E-9426437IPR001128Cytochrome P450
PfamPF010664.8E-9473501IPR000462CDP-alcohol phosphatidyltransferase
PROSITE patternPS003790479501IPR000462CDP-alcohol phosphatidyltransferase
Gene3DG3DSA:1.25.40.101.8E-9638681IPR011990Tetratricopeptide-like helical domain
SuperFamilySSF484527.11E-9640681IPR011990Tetratricopeptide-like helical domain
SMARTSM000280.004645678IPR019734Tetratricopeptide repeat
PROSITE profilePS502938.991645678IPR013026Tetratricopeptide repeat-containing domain
PROSITE profilePS500058.467645678IPR019734Tetratricopeptide repeat
Gene3DG3DSA:1.10.10.601.8E-9686713IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008654Biological Processphospholipid biosynthetic process
GO:0055114Biological Processoxidation-reduction process
GO:0016020Cellular Componentmembrane
GO:0003677Molecular FunctionDNA binding
GO:0005506Molecular Functioniron ion binding
GO:0005515Molecular Functionprotein binding
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016780Molecular Functionphosphotransferase activity, for other substituted phosphate groups
GO:0020037Molecular Functionheme binding
Sequence ? help Back to Top
Protein Sequence    Length: 752 aa     Download sequence    Send to blast
MELSILLIML LLFIFLSSAF CLIRIGTSPK AMEGIPGSMG WPIIGESLSF LSDFSSPSGI  60
FSFMNKRQQR YGKVFKSFVL GRYTVFMTGR EASKILLSGK DGMVSLNLFY TGQQVLGPNS  120
LLQTDGEAHK RLRRLIAEPL SIDGLKKYFH FINTQAIETL DQWTGKRVLV LEEASSFTLK  180
VIGNMIMSLE PSGEEQERFR ANFKIISSSF ASMPFKIPGT AFHRGIKARD SMYAMIDSII  240
AKRRNGEVIQ QDFLESLIIK HSKGTNTIDN EDNKLTDQQM KDNILTLLVA GHDTTTAALT  300
WLVKFLGENP AVLEQLREEH LQIQANRKDG TNLTWSEVNN MPYTNKVISE TLRRATILPW  360
YSRKAAQDFE IDGYNIKKGW SINLDVVSIH HDPETFPDPE KFDPSRFDAP LKTFSYLGFG  420
SGPRMCPGMN LAKLEICIFI HNLVCKYKWR ALEKDDSVQP TLVRMPKNKY PIMTFDAVDG  480
KQARRTNSSS PLGELFDHGC DALASTFETM DFGSTAMCGG DSFWFWVILS IPFYGATWEH  540
YFTNALILSI VNGPTEGLAL IYGLHFMTAI VGAQWWAQPF QQSIPFLSWI PYVNELPTYK  600
AAVYLLTPIA ILPTVACNIS NVHKIVKARK GNMLLALAML NSQNVVYWAN RSLAHTKLEE  660
YGSAIQDATK AIEVDPKYSK FSSSISEATP KTILDLMDLD GLNLYHVKSH LQKAHNGWLL  720
PLQMLVGGIA AVNKNDIDQH AVDTKIEYSL AA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6a15_A2e-653646615441Cytochrome P450 90B1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.197020.0boll| ovule
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX5774312e-40JX577431.1 Gossypium hirsutum clone NBRI_GE9253 microsatellite sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016742229.10.0PREDICTED: abscisic acid 8'-hydroxylase 3-like isoform X1
TrEMBLA0A1U8NW760.0A0A1U8NW76_GOSHI; abscisic acid 8'-hydroxylase 3-like isoform X1
STRINGGorai.005G079800.10.0(Gossypium raimondii)