PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A05G0674
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 118aa    MW: 13444.3 Da    PI: 9.6554
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A05G0674genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1383.5e-123788153
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53
                 e+e k+ + k+kNR+AA +sR+R ++ +  Leekv++L +eN  Lkk l +l+
  Gh_A05G0674 37 EAEQKKRKNKIKNRIAAAKSRARSQEHTRFLEEKVEQLRNENAHLKK-LLSLE 88
                 67899*****************************************5.44444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-113486No hitNo description
PfamPF001704.8E-93786IPR004827Basic-leucine zipper domain
SMARTSM003386.9E-637108IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.0363983IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-94187No hitNo description
PROSITE patternPS0003604459IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    Send to blast
MQVLAADAPS GSGELLVMND LPVYKRGRNN IQEAIEEAEQ KKRKNKIKNR IAAAKSRARS  60
QEHTRFLEEK VEQLRNENAH LKKLLSLEAA AAERLPEERE VMQGKKAKQC LESEELHT
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.152392e-83boll
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016750891.13e-79PREDICTED: protein FD-like isoform X1
TrEMBLA0A1U8PI597e-78A0A1U8PI59_GOSHI; protein FD-like isoform X1
STRINGGorai.009G085700.16e-53(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM3575022