PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A05G0937
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 341aa    MW: 37822.6 Da    PI: 9.6283
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A05G0937genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.51.6e-09139188554
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                  k+ +r ++NR++A+rsR RK +++   e+kv++Le+    L +++++ k+
  Gh_A05G0937 139 KKLKRVISNRLSAQRSRIRKIQRLCDMEKKVQSLETLVAVLSSKVQREKD 188
                  899**********************************9999999998665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.9E-8134186No hitNo description
SMARTSM003383.0E-6135206IPR004827Basic-leucine zipper domain
PfamPF077162.2E-7137185IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.967137200IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.0E-8139193No hitNo description
CDDcd147031.16E-13140190No hitNo description
PROSITE patternPS000360142157IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MNGKNKMIEQ QKPAAGSGSG SSSASAWPKY SIGASAIPTR FSFMKPANLP ICPTSFNGVN  60
PKPYSMNQVG GAGSSAGAIS SATKTSFFQG CHSFAMRSEK NNTDKPLMPP VENSARTEAN  120
VDVVQVRGGH LPEQNMDPKK LKRVISNRLS AQRSRIRKIQ RLCDMEKKVQ SLETLVAVLS  180
SKVQREKDKQ FLLRIEQQEL RERIEAFANR ETMVDARIEK RRAEIESLRQ PQFTSQQQQM  240
QVQTRHANSN QGGGGDGDYM GKEINRLNQL SLHQKNPGDV MMPDRQTSGG QLPNVGLDQY  300
GVGELQNLFL CEPNPQQDGS FDSDIEEIQQ ILNFDPRDGL L
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016752540.10.0PREDICTED: basic leucine zipper 34-like
TrEMBLA0A1U8PMY60.0A0A1U8PMY6_GOSHI; basic leucine zipper 34-like
STRINGGorai.009G112200.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2231545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.12e-13bZIP family protein