PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Gh_A05G1335

Organism

Gossypium hirsutum

Taxonomic ID

3635

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium

Family

VOZ

Protein Properties

Length: 483aa MW: 53796.2 Da PI: 5.6264

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Gh_A05G1335	genome	NAU-NBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	434.8	1.2e-133	208	423	2	217
VOZ 2 ppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdls 99 ppsaflgpkcalwdc+rpaq +w qdycssfha+la+neg+pg+ p+lrp+gi+lkdgllfaalsak+qgk+vgipecegaatakspwna+elfdls Gh_A05G1335 208 PPSAFLGPKCALWDCPRPAQVLDWSQDYCSSFHAALAMNEGPPGMGPILRPGGIGLKDGLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLS 305 7*********************************************************************************************** PP VOZ 100 llegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksak 197 +l+ge+irewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyein++da+alyrlelklvd+kksak Gh_A05G1335 306 VLDGESIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKCDACALYRLELKLVDGKKSAK 403 ********************************************************************************************** PP VOZ 198 gkvskdsladlqkklgrlta 217 gk ++d++adlqk++grlta Gh_A05G1335 404 GKSANDTVADLQKQMGRLTA 423 ****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence Send to blast
MGKGSRSNCK SASHKLFKDR AKNRVDDLQG MFLDLQFARK ESRSVDVAVL EEQVHQMLRE 60 WKAELNEPSP ASSLQQGGSL GSFSSDICRL LQLCEEEDDA TSVLAAPKPE PNDQNLQVGD 120 TAAFQEGYGV NQGQHERGFP LVDHCKDSPS GVRTMPINNL DEATQLEYHQ FDLHQDFEHF 180 YTGFNGTGFS GEDAMLHTSS YLPSICLPPS AFLGPKCALW DCPRPAQVLD WSQDYCSSFH 240 AALAMNEGPP GMGPILRPGG IGLKDGLLFA ALSAKAQGKD VGIPECEGAA TAKSPWNAPE 300 LFDLSVLDGE SIREWLFFDK PRRAFESGNR KQRSLPDYSG RGWHESRKQV MNEFGGLKRS 360 YYMDPQPLNH FEWHLYEYEI NKCDACALYR LELKLVDGKK SAKGKSANDT VADLQKQMGR 420 LTAEFPTDNK RYVKGRAKIN AKVTVGNPYS TQNAVAPTSE KFDYGHGLQY DYLVDDLSGY 480 YLT

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence Send to blast

MGKGSRSNCK SASHKLFKDR AKNRVDDLQG MFLDLQFARK ESRSVDVAVL EEQVHQMLRE  60
WKAELNEPSP ASSLQQGGSL GSFSSDICRL LQLCEEEDDA TSVLAAPKPE PNDQNLQVGD  120
TAAFQEGYGV NQGQHERGFP LVDHCKDSPS GVRTMPINNL DEATQLEYHQ FDLHQDFEHF  180
YTGFNGTGFS GEDAMLHTSS YLPSICLPPS AFLGPKCALW DCPRPAQVLD WSQDYCSSFH  240
AALAMNEGPP GMGPILRPGG IGLKDGLLFA ALSAKAQGKD VGIPECEGAA TAKSPWNAPE  300
LFDLSVLDGE SIREWLFFDK PRRAFESGNR KQRSLPDYSG RGWHESRKQV MNEFGGLKRS  360
YYMDPQPLNH FEWHLYEYEI NKCDACALYR LELKLVDGKK SAKGKSANDT VADLQKQMGR  420
LTAEFPTDNK RYVKGRAKIN AKVTVGNPYS TQNAVAPTSE KFDYGHGLQY DYLVDDLSGY  480
YLT

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Ghi.3696	0.0	boll\| ovule\| root

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016730807.1	0.0	PREDICTED: transcription factor VOZ1
Refseq	XP_016730808.1	0.0	PREDICTED: transcription factor VOZ1
Refseq	XP_016730809.1	0.0	PREDICTED: transcription factor VOZ1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A1U8MZ10	0.0	A0A1U8MZ10_GOSHI; transcription factor VOZ1
STRING	Gorai.009G165800.1	0.0	(Gossypium raimondii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM6667	27	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]