PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Gh_A05G2175

Organism

Gossypium hirsutum

Taxonomic ID

3635

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium

Family

bZIP

Protein Properties

Length: 160aa MW: 17189.4 Da PI: 10.8698

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Gh_A05G2175	genome	NAU-NBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	20.1	1.4e-06	139	160	3	24
XXCHHHCHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRK 24 +++r + ++kNRe+A sR+RK Gh_A05G2175 139 DDRRLKLMMKNRESAAQSRARK 160 789******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE pattern	PS00036	0	144	159	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence Send to blast
MEEVGKDISL SSLNGISLQG KHGTLISTTA TNPAFPSMIL QEFLATPFNN IPPTTSSGVL 60 SNEEPTFLCS LSPTPATILS LNTRSDPVKS NPAVNNRTAI APPSLGAAHN STFQGFGSSA 120 RVFPSFFRKR AQGNNENPDD RRLKLMMKNR ESAAQSRARK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017604126.1	1e-111	PREDICTED: protein FD-like
TrEMBL	A0A0D2TW17	1e-100	A0A0D2TW17_GOSRA; Uncharacterized protein
TrEMBL	A0A2P5R4M0	1e-100	A0A2P5R4M0_GOSBA; Uncharacterized protein
STRING	Gorai.009G269300.1	1e-101	(Gossypium raimondii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM28300	3	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35900.1	5e-16	bZIP family protein