PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A06G0989
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family EIL
Protein Properties Length: 690aa    MW: 77908 Da    PI: 6.304
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A06G0989genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3417.51.4e-127383871320
                  XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
         EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkek 98 
                  +el++rmwkd+++lkr++er+k  +  ++ a+++kk +k+++qa+rkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+g+sd++raWW+ek
  Gh_A06G0989  38 DELERRMWKDRIKLKRIRERQKIAV--QQ-ALEKKKLKKTSDQAQRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWQEK 132
                  79*************9999998755..55.599***************************************************************** PP

                  XXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.---- CS
         EIN3  99 vefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppyk 196
                  v+fd+ngpaai+ky+a++l++ ++++   ++ + ++sl++lqD+tlgSLLs+lmqhcdppqr++plek ++pPWWPtG+e+ww +lgl++ q+ ppyk
  Gh_A06G0989 133 VKFDKNGPAAIAKYEADCLAMIESDNG--RNGNLQSSLKDLQDATLGSLLSSLMQHCDPPQRKYPLEKRIPPPWWPTGNEDWWVKLGLQQGQS-PPYK 227
                  ********************9988888..68999**********************************************************9.9*** PP

                  -GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX...........XXXXXXXXXXXXXXXXXX CS
         EIN3 197 kphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss...........slrkqspkvtlsceqked 283
                  kphdlkk+wkv+vLt+vikhmsp+ ++ir+++rqsk+lqdkm+akes+++l vl +ee+++++ s+++               +++++  +s+++++d
  Gh_A06G0989 228 KPHDLKKMWKVGVLTSVIKHMSPDTAKIRRHVRQSKCLQDKMTAKESAIWLGVLAREEALIQQPSSDNGtsgvtelprlgC--SDKKQPAVSTDSDYD 323
                  *******************************************************************44445666654321..266777788888899 PP

                  XXXXXXXX.XXXXXXXXXX...........................XXXXXXXXXXXXXXXXXX CS
         EIN3 284 vegkkeskikhvqavktta...........................gfpvvrkrkkkpsesakv 320
                  v+g ++  +++      t+                            ++ + +rk+++ +s+  
  Gh_A06G0989 324 VDGVDDGVVSAEPVAYITNydshgvvsaepvayitnydshpvqineRVAKQPRRKRPNLRSSHG 387
                  9955554444333333333455566666666666666666666655555555555555555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.2E-12238285No hitNo description
Gene3DG3DSA:1.10.3180.104.5E-69161293IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.06E-59166288IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 690 aa     Download sequence    Send to blast
MAELEDIGAD ISSDIEVDDF RCQNIAEKDV SEEEIEADEL ERRMWKDRIK LKRIRERQKI  60
AVQQALEKKK LKKTSDQAQR KKMSRAQDGI LKYMLKLMEV CKARGFVYGI IPEKGKPVSG  120
SSDNIRAWWQ EKVKFDKNGP AAIAKYEADC LAMIESDNGR NGNLQSSLKD LQDATLGSLL  180
SSLMQHCDPP QRKYPLEKRI PPPWWPTGNE DWWVKLGLQQ GQSPPYKKPH DLKKMWKVGV  240
LTSVIKHMSP DTAKIRRHVR QSKCLQDKMT AKESAIWLGV LAREEALIQQ PSSDNGTSGV  300
TELPRLGCSD KKQPAVSTDS DYDVDGVDDG VVSAEPVAYI TNYDSHGVVS AEPVAYITNY  360
DSHPVQINER VAKQPRRKRP NLRSSHGHRQ PLPIHGDQQS VPSHDDQQPM SNHITNYDPH  420
PVQINERVAK LPRRKRPRLR SSHGRQQLLP IHGDQQSVLS HGDQQPMSNH GDQQSVPSHG  480
DQQPGPRHYE RENAESISTL PDINQTDLSF MEYHMPVTQQ ENDASTELRH VEDGLDVQPH  540
LPASEYCHYP AIPTATEIST QRPMLYTLEQ HELHQGAAYE FYNQSAELRP GHDSQQTLMD  600
MNVLHVRPEN GVDASAPGGN GHEIAGGELH HYVKDLLHNE QDRAVHNPFS SPTSDPSFFG  660
GFHSPFELPF DGTSSLDELL DDDLIQYFGA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A4e-711652969140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1433439RKRPRLR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017646430.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein isoform X3
TrEMBLA0A2P5WEH20.0A0A2P5WEH2_GOSBA; Uncharacterized protein
STRINGGorai.010G128700.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM46582548
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-156ETHYLENE-INSENSITIVE3-like 3