PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A07G1609
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family G2-like
Protein Properties Length: 283aa    MW: 31954.5 Da    PI: 9.7044
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A07G1609genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like92.43.8e-29196250256
      G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                  +r+ W+p+LH+rFve ++ LGG  +AtPk+i+e+m+v+gLt+++vkSHLQkYRl+
  Gh_A07G1609 196 NRRSWSPQLHARFVETLHILGGMYEATPKQIREMMNVDGLTNDQVKSHLQKYRLH 250
                  799**************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.529192252IPR017930Myb domain
SuperFamilySSF466895.82E-17193253IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.9E-25194253IPR009057Homeodomain-like
TIGRFAMsTIGR015573.0E-23195250IPR006447Myb domain, plants
PfamPF002497.7E-7197248IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MASSSNSLGL KLSLKPTYVP KTITDLMKDL PNIENETDKL AVLSDYISQH EEELNSIAAL  60
RGHLPQCMLL LMEALVTLRQ EFLKIKNGMV ASKEGDTDMV LKENSGMKRK RCEKMLEAER  120
VPNSKCDFKG KGVMMNSSPP HHPSHHKHPK TFRDFVQASN QNPSSNGGGG LNLRADNRTL  180
LNYKHKPLTQ PIWKNNRRSW SPQLHARFVE TLHILGGMYE ATPKQIREMM NVDGLTNDQV  240
KSHLQKYRLH SRKQQEGCAQ QVAKGEDPWN PDRDGGEPMA PAN
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX6224503e-43JX622450.1 Gossypium hirsutum clone NBRI_GE69182 microsatellite sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017645970.10.0PREDICTED: putative two-component response regulator ARR20
TrEMBLA0A0B0PYW00.0A0A0B0PYW0_GOSAR; Uncharacterized protein
STRINGGorai.001G206600.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM15410716
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.12e-23G2-like family protein