PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A07G1668
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bHLH
Protein Properties Length: 145aa    MW: 16705.6 Da    PI: 11.3086
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A07G1668genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.63.9e-077399330
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
          HLH  3 rahnerErrRRdriNsafeeLrellPka 30
                 ++h+e+Er RR+riN  +++Lr+llP +
  Gh_A07G1668 73 KSHSEAER-RRERINAHLDTLRTLLPYR 99
                 57999997.78***************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.7E-573100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.6E-57399IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MEAIIETIIA LIIGNNKKVA NHQNFVLQKL SFWFAPTTRP PVLDNEKREL VVKSPVKVGK  60
KSMAEEKVIA ALKSHSEAER RRERINAHLD TLRTLLPYRE KGNWIWEHAK LKARMQTLQR  120
NLRFKRGFRE GTEAAPRKKV AAVSA
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.126454e-78boll| ovule
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017635773.15e-48PREDICTED: transcription factor AIG1-like isoform X1
RefseqXP_017635823.15e-48PREDICTED: transcription factor AIG1-like isoform X2
TrEMBLA0A2P5XIG24e-33A0A2P5XIG2_GOSBA; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.11e-06bHLH family protein