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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Gh_A08G1694 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
GRAS |
| Protein Properties |
Length: 257aa MW: 29155 Da PI: 6.6784 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_A08G1694 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 206.2 | 1.9e-63 | 1 | 245 | 120 | 374 |
GRAS 120 sqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldes 217
+qGlQW aL+++La+R+egpp + iTg+gs s + l etg++L+++A+++g+pf+f++ +ak++ ++++e+ ++++gEa+a+++ h+l+d +
Gh_A08G1694 1 MQGLQWSALFHTLATRTEGPPFVTITGLGS----SMKLLVETGNQLSNIARQFGIPFDFHP-IAKKFGEIDIETVQLQRGEAVAIHWLQ--HSLYDAT 91
69****************************....9**************************.7*************************9..99*9999 PP
GRAS 218 vsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekW 315
++ ++ +Lk + +l P+v+++veq+++h ++sFl+rf+++l+yys++fds+ + l++e+ +r+ +E ll rei+nv+a g +r+ + + ++W
Gh_A08G1694 92 GPNQN----TLKHIEQLAPTVLTLVEQDLSH-QGSFLDRFVNSLHYYSTIFDSFGSYLSAEDPNRHRIEYCLLYREIKNVLAIGGPARTRDDKFEHNW 184
99999....**********************.899********************************************************9999*** PP
GRAS 316 rerlee.aGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
r+ l + F+ +p+s+k++++ +l+l+++ + gy++ +g+l gWk+ L+++SaW+
Gh_A08G1694 185 RSELARnRKFQLMPISSKTMAETELMLNMFWpGYGYSLVGYDGTLRVGWKETCLFTASAWT 245
*99976479*********************99****************************6 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 257 aa
Download sequence Send
to blast |
MQGLQWSALF HTLATRTEGP PFVTITGLGS SMKLLVETGN QLSNIARQFG IPFDFHPIAK 60
KFGEIDIETV QLQRGEAVAI HWLQHSLYDA TGPNQNTLKH IEQLAPTVLT LVEQDLSHQG 120
SFLDRFVNSL HYYSTIFDSF GSYLSAEDPN RHRIEYCLLY REIKNVLAIG GPARTRDDKF 180
EHNWRSELAR NRKFQLMPIS SKTMAETELM LNMFWPGYGY SLVGYDGTLR VGWKETCLFT 240
ASAWTMTTVH DGSGWSG
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in shoot apical meristem, leaf primordia, between the cortex and the differentiating vessels in lower shoots and in root endodermis. {ECO:0000269|PubMed:11333309}. |
| Uniprot | TISSUE SPECIFICITY: Expressed in the initial daughter cell before its asymmetric division and remains expressed in the endodermal cell layer after the division. {ECO:0000269|PubMed:17446396}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Putative transcription factor involved in asymmetric cell division. {ECO:0000250}. |
| UniProt | Transcription factor required for quiescent center cells specification and maintenance of surrounding stem cells, and for the asymmetric cell division involved in radial pattern formation in roots. Essential for cell division but not differentiation of the ground tissue. Regulates the radial organization of the shoot axial organs. Restricts SHR movment and sequesters it into the nucleus of the endodermis (By similarity). {ECO:0000250, ECO:0000269|PubMed:17446396}. |
