PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A09G0521
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 162aa    MW: 18705 Da    PI: 10.0372
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A09G0521genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1414.2e-1380134559
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                  ++ rr+++NR +ArrsR RK+  +e+L+++vk+L+ +N++L ++l++l+++   l
  Gh_A09G0521  80 RKRRRMISNRASARRSRMRKRNHLENLTNEVKQLQIQNQELNNRLKSLSDHNHCL 134
                  5789********************************************9987665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.8E-1471135No hitNo description
SMARTSM003386.1E-1376140IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.41578135IPR004827Basic-leucine zipper domain
PfamPF001705.7E-1280136IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.75E-1280134No hitNo description
PROSITE patternPS0003608398IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MFSTVSDIFS PDSMLDNDPI PDIETNIMKW DWSELFSPGQ STGSARSSGT GSDEAKQSLT  60
GGSTSSLKDP NQRVPTIDER KRRRMISNRA SARRSRMRKR NHLENLTNEV KQLQIQNQEL  120
NNRLKSLSDH NHCLRIDNNR VRFECSILQQ EVLDMRQLLV FR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17983RKRRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016669978.11e-116PREDICTED: bZIP transcription factor 53-like
TrEMBLA0A1U8I1961e-115A0A1U8I196_GOSHI; bZIP transcription factor 53-like
STRINGGorai.006G054500.11e-101(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2241735
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.12e-16basic leucine-zipper 5