PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Gh_A09G0637

Organism

Gossypium hirsutum

Taxonomic ID

3635

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium

Family

bZIP

Protein Properties

Length: 156aa MW: 18028.9 Da PI: 9.1181

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Gh_A09G0637	genome	NAU-NBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39	1.8e-12	24	82	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 k+ +r+++NRe+ArrsR +K++ +e L ++v++L+ + + + ++ e l +++ l+se+ Gh_A09G0637 24 KKRKRMISNRESARRSRMKKQKLLEDLVTEVASLKVQIHNYTNKYEALMQKIVVLESEN 82 899***********************************************999999887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.4E-14	20	84	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	6.6E-8	22	80	No hit	No description
PROSITE profile	PS50217	9.829	22	85	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.0E-10	24	82	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.42E-11	24	79	No hit	No description
CDD	cd14702	4.97E-16	25	74	No hit	No description
PROSITE pattern	PS00036	0	27	42	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence Send to blast
MSNVPRMMSS GSEPDARGVN VDEKKRKRMI SNRESARRSR MKKQKLLEDL VTEVASLKVQ 60 IHNYTNKYEA LMQKIVVLES ENNALKVQQM ELAQYLKNLQ LMQTQMELLE FNLMNQPGRT 120 LCDIIVDINE PPKVQSWQCH GSNQPAIMAS TEMLNY

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016670215.1	1e-112	PREDICTED: bZIP transcription factor 53-like
TrEMBL	A0A1U8HW23	1e-111	A0A1U8HW23_GOSHI; bZIP transcription factor 53-like
STRING	Gorai.006G079800.1	1e-106	(Gossypium raimondii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM3036	27	63

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49450.1	1e-21	basic leucine-zipper 1