PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Gh_A09G2151

Organism

Gossypium hirsutum

Taxonomic ID

3635

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium

Family

NAC

Protein Properties

Length: 84aa MW: 9869.09 Da PI: 4.2328

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Gh_A09G2151	genome	NAU-NBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	30.1	1.4e-09	36	81	2	45
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePw 45 p+GfrF Pt eelv++yL kkv g+ l+++++ +++v+ y++ P Gh_A09G2151 36 PVGFRFLPTPEELVKQYLIKKVLGNLLPVSDFleVEDVEFYTTPPM 81 89************************88877645888889998885 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.22E-8	33	80	IPR003441	NAC domain
PROSITE profile	PS51005	11.854	35	84	IPR003441	NAC domain
Pfam	PF02365	2.6E-5	36	66	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 84 aa Download sequence Send to blast
MAMVEVEKNY EDVHQNWGHR IPAEEDYYND WHNQPPVGFR FLPTPEELVK QYLIKKVLGN 60 LLPVSDFLEV EDVEFYTTPP MSSG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2P5Q6G8	8e-51	A0A2P5Q6G8_GOSBA; Uncharacterized protein
STRING	Gorai.006G267800.1	8e-51	(Gossypium raimondii)