PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A12G0319
Common NameNAC11
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family NAC
Protein Properties Length: 291aa    MW: 33666.2 Da    PI: 7.498
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A12G0319genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1501.1e-46171433128
          NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 
                  pGfrFhPt+eel+ +yLk+ + g+kl+  +vi  ++iy+++P+dLp   k +e+ewyfF++rd+k+ +g r+nr+t++gyWkatg+d++++s    ++
  Gh_A12G0319  17 PGFRFHPTEEELLGFYLKNMIYGNKLRD-DVIGFLNIYHHDPSDLPGLSKIGEREWYFFVPRDRKHGNGGRPNRTTENGYWKATGSDRKIVSLsdPKR 113
                  9************************999.99***************8778899*************************************99766677 PP

          NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                   +glkktLvfykgrap+g+ktdWvm+eyrl
  Gh_A12G0319 114 ITGLKKTLVFYKGRAPRGNKTDWVMNEYRL 143
                  7***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100553.22915161IPR003441NAC domain
SuperFamilySSF1019414.05E-5616161IPR003441NAC domain
PfamPF023651.3E-2517143IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MNCQSNSDDT TLEMELPGFR FHPTEEELLG FYLKNMIYGN KLRDDVIGFL NIYHHDPSDL  60
PGLSKIGERE WYFFVPRDRK HGNGGRPNRT TENGYWKATG SDRKIVSLSD PKRITGLKKT  120
LVFYKGRAPR GNKTDWVMNE YRLPDGCSLP KDIVLCKIYR KATSLKVLEQ RAALEEELKA  180
TNTTTSSPLS SLQTISFCNP KEDLVPSISE TREFFKKEIE EEKELVEEKK DRIAKENKVS  240
PPSLHFPVGN EKLAELQLPK IINDWTQDQF WTQLNSPWFQ NLTPYANILN F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-4591618168Stress-induced transcription factor NAC1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.188510.0boll
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC1106460.0KC110646.1 Gossypium hirsutum NAC protein 11 (NAC11) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001314276.10.0NAC transcription factor 29-like
SwissprotQ10S658e-94NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A2P5Y7W00.0A0A2P5Y7W0_GOSBA; Uncharacterized protein
TrEMBLL7XDC60.0L7XDC6_GOSHI; NAC protein 11
STRINGGorai.008G038800.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM38992860
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-109NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]