PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D01G0390
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family BES1
Protein Properties Length: 325aa    MW: 35068.9 Da    PI: 8.3612
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D01G0390genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822214.52.6e-6621451150
       DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98 
                  ++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyr+g+kp e+++++g sa++sp+ss++   
  Gh_D01G0390   2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRNGCKPVERMDIVGGSATVSPCSSYH--- 96 
                  5899*******************************************************************************************... PP

       DUF822  99 kssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
                       +sp++sy++sp+sssfpsp+s++ + + +   +sl+p+l++ls++sss+
  Gh_D01G0390  97 -----PSPRASYNPSPASSSFPSPASSSYVVNPNGdvNSLFPWLKNLSSASSSA 145
                  .....*******************9999887766577**********9987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.1E-653139IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVEPDGTTY RNGCKPVERM DIVGGSATVS PCSSYHPSPR ASYNPSPASS SFPSPASSSY  120
VVNPNGDVNS LFPWLKNLSS ASSSASSSKR PYSYIHGGSI SAPVTPPLSS PTARTPRMKN  180
DWEDQSALPG WSAQQHSFLP SSTPPSPGRQ IVPDPEWFSG LQTPHSRPTS PTFSLVSSNP  240
FGFKEEVLAG GGSRMWTPGQ SGTCSPAIAA GLDQTADVPM SEVISDEFAF GSNATGLVKP  300
WEGERIHEEC GSDDLELTLG SSKTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-22677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-22677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-22677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-22677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.152650.0boll| ovule
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2431160.0AC243116.1 Gossypium raimondii clone GR__Ba0066P11-hvl, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016722655.10.0PREDICTED: BES1/BZR1 homolog protein 4-like isoform X1
RefseqXP_016722656.10.0PREDICTED: BES1/BZR1 homolog protein 4-like isoform X2
SwissprotQ9ZV881e-142BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A1U8M7B50.0A0A1U8M7B5_GOSHI; BES1/BZR1 homolog protein 4-like isoform X1
STRINGGorai.002G052400.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19172781
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-126BES1/BZR1 homolog 4