PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D01G1708
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 263aa    MW: 28482.2 Da    PI: 10.3947
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D01G1708genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.23.1e-07206231429
                  XCHHHCHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeie 29 
                   +++rr++kNRe+A rsR+RK ae+ 
  Gh_D01G1708 206 QQKQRRMIKNRESAARSRERKHAELN 231
                  689*******************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.2E-6201232No hitNo description
PROSITE patternPS000360210225IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MASSKVITTT SQTNPDLPRQ PSLCPSLSTL LADLQNQQNN QNQSQNGLGS MNMDDLLKNI  60
CSSPPPPPPT SDSHPQFAGV SISCEGSFSL PKDVANKSVD EVWKDIVVGG DDKRQGNPPV  120
GMTLEDFLTK AGAVREEDVR GVVNQVGVGA GVYPVDPAVI NGGGNHFSAF GNSGGVDHQR  180
LVAVAGGGAR GKRRAVEAPP LDKATQQKQR RMIKNRESAA RSRERKHAEL NKARFKQLME  240
NLVPVVEKRR PPRVLRRVHS MQW
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016711655.11e-159PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 4
RefseqXP_017616076.11e-159PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 4
TrEMBLA0A0D2QGF11e-164A0A0D2QGF1_GOSRA; Uncharacterized protein
STRINGGorai.002G207000.11e-155(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM16538611
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.12e-15ABA-responsive element binding protein 3