PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D05G2039
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 141aa    MW: 16777.8 Da    PI: 7.691
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D05G2039genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.23.6e-1356104553
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                  ++ rr+ +NRe+ArrsR RK++ +e+ +++v  L+ eN++Lk++l+   
  Gh_D05G2039  56 RKKRRMKSNRESARRSRWRKRMHLENITDEVNRLSVENQQLKNRLSAVI 104
                  67889999**********************************9998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.8E-1252103No hitNo description
SMARTSM003382.1E-1452123IPR004827Basic-leucine zipper domain
PfamPF077163.9E-1153103IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.86454103IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.25E-1056108No hitNo description
CDDcd147026.42E-1457108No hitNo description
PROSITE patternPS0003605974IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    Send to blast
MFLSQEADQF QLPVNETGFT REELEELLSF LESNEPVSPN SGSEGSTRAV YSPDERKKRR  60
MKSNRESARR SRWRKRMHLE NITDEVNRLS VENQQLKNRL SAVINQYHIV WRENEQMRSE  120
SEALWAKLLD LYWTLATMQS R
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15661KKRRMK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016684672.15e-99PREDICTED: basic leucine zipper 8-like
TrEMBLA0A1U8J2W61e-97A0A1U8J2W6_GOSHI; basic leucine zipper 8-like
TrEMBLA0A2P5Q2W21e-97A0A2P5Q2W2_GOSBA; Uncharacterized protein
STRINGGorai.009G221800.11e-97(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM122322432
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59530.12e-15basic leucine-zipper 4