PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D05G2714
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 321aa    MW: 35763.2 Da    PI: 6.3205
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D05G2714genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.96.8e-16251300555
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                  +r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN++L+ + +el k+
  Gh_D05G2714 251 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLR-KQKELDKM 300
                  79****************************************.55666666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.7E-15240294No hitNo description
SMARTSM003382.5E-12247319IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.76249294IPR004827Basic-leucine zipper domain
PfamPF001703.0E-13251295IPR004827Basic-leucine zipper domain
CDDcd147074.33E-25251305No hitNo description
SuperFamilySSF579596.88E-11251296No hitNo description
PROSITE patternPS000360254269IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MGIQTMGSQG DSGSNGKQLQ FQQLTQQNSM YSLTLDEVQN QLGDLGKPLS SMNLDELLKN  60
VWTLEANQTF GMDSDGTVLT NQASLQRQAS LSLTGALSKK TVDEVWRDIQ QSKNDGEKKS  120
RERQPTLGEM TLEDFLVKAG VVAEASTDGD IGASIAGVDL SVAPQFAQQG QWMQYPQPQY  180
HHPQQSIMGV YMPSQPMPRP LDLGTAAVMD VSYPENQVPL HSPLMGTLSD TQASGRKRGA  240
PEDIVEKNVE RRQKRMIKNR ESAARSRARK QAYTNELENK VSRLEEENER LRKQKELDKM  300
LPSAPPPEPK YQLRRTSSAP F
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.205100.0boll
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}.
UniprotTISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}.
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00409DAPTransfer from AT3G56850Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP9382990.0KP938299.1 Gossypium hirsutum strain KK1543 bZIP transcription factor (bZIP15) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012447401.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
RefseqXP_012447402.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
RefseqXP_012447403.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
RefseqXP_012447404.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
SwissprotQ9LES31e-101AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A0D2UW500.0A0A0D2UW50_GOSRA; Uncharacterized protein
STRINGGorai.009G301200.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM18842883
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.16e-95ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]