PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D05G2786
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 283aa    MW: 31641 Da    PI: 4.7622
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D05G2786genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.24.8e-10120166450
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                   k++rr  +NR AA rsR++Kk++++ Le k+  Le+e ++L   l+
  Gh_D05G2786 120 AKKQRRQLRNRDAAVRSREKKKMYVKDLEMKSRYLEGECRRLSRVLQ 166
                  69************************************999987665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.9E-6114181IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.4E-12115179No hitNo description
PROSITE profilePS502179.783119176IPR004827Basic-leucine zipper domain
PfamPF001705.5E-10120176IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.38E-10121179No hitNo description
CDDcd147041.26E-16122173No hitNo description
PROSITE patternPS000360124139IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MEEINWDTLL LEVDLPDFGD ILDNEPEPVT EPPPQPCSTQ NSDEEPAVSS WIGEIEKVLM  60
KDDNFDHRVE TQPVSDDDFL ADLLVDSPPS SGGDVAGVDG ADLHKQSQTH TDVDKDDPIA  120
KKQRRQLRNR DAAVRSREKK KMYVKDLEMK SRYLEGECRR LSRVLQCFIA ENQALRLTLH  180
KGCAFDTSST KQESAVLLLE SLLLGSLLWF LGIMCLFTLP ILPRSVLEAV PMANEETQGP  240
ERVAPRGAGS NRVGPSFVKS RRCKASRGKM KEISCFMGIL VPF
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.21570.0boll| ovule| root| stem
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016685923.10.0PREDICTED: bZIP transcription factor 60-like
TrEMBLA0A1U8JB840.0A0A1U8JB84_GOSHI; bZIP transcription factor 60-like
STRINGGorai.009G309200.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM46342848
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.12e-29basic region/leucine zipper motif 60