PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Gh_D05G2891

Organism

Gossypium hirsutum

Taxonomic ID

3635

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium

Family

Dof

Protein Properties

Length: 322aa MW: 35134.2 Da PI: 8.8518

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Gh_D05G2891	genome	NAU-NBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.8	1.1e-38	71	130	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r++k+s+ Gh_D05G2891 71 ASALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRDKRSK 130 6789****************************************************9975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-30	54	119	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.3E-32	73	128	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.441	74	128	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	76	112	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence Send to blast
MVFSSLPSYL DPPNWQQRPP FLQQPGVITS ENHHNSQLPP PAPPSAAGGA GGIRPGSMVE 60 RAKLAKIPHP ASALKCPRCE STNTKFCYFN NYSLSQPRHF CKTCRRYWTR GGALRNVPVG 120 GGCRRDKRSK GRKRSKSPSV TSERQTGSSS SATTINSNGC TEMLSHVNPA AAPQLPPLAP 180 LHHLGDYNSG DIEVTFGDET RIMSSNGVGL MLPDWRSAQQ VQQFPFLTSL DHPQTGLYSF 240 VNETMEPTGY AGQQQLLGSK PLESTITESS AVKMEDTPSP WLNQSRNFLG NSGNDDQYWF 300 GGGGNPWTDL SGFTSSSITH FF

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016685882.1	0.0	PREDICTED: dof zinc finger protein DOF3.6-like isoform X1
TrEMBL	A0A0D2TYF2	0.0	A0A0D2TYF2_GOSRA; Uncharacterized protein
STRING	Gorai.009G319300.1	0.0	(Gossypium raimondii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM1713	28	86

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	2e-41	DNA binding with one finger 2.4