PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D06G1881
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family G2-like
Protein Properties Length: 220aa    MW: 23846.2 Da    PI: 6.0071
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D06G1881genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like45.31.9e-14661111052
      G2-like  10 LHerFve.aveqLGGse..kAtPktilelmkvkgLtlehvkSHLQk 52 
                  LHe+ ++ av ++ G++  +AtPk+i+elm+v+gLt+++vkSHLQ+
  Gh_D06G1881  66 LHECGLSyAVVSIMGPQssVATPKQIRELMQVDGLTNDEVKSHLQM 111
                  66665533555555654227*************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.5E-1177112IPR009057Homeodomain-like
TIGRFAMsTIGR015576.2E-1184111IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MDFCFFFHRY YRSVLISSAF ITNPQHCLHR RPISATSDEC CSVQLIDGDG SFNDTGIESF  60
IKEVKLHECG LSYAVVSIMG PQSSVATPKQ IRELMQVDGL TNDEVKSHLQ MVVVECDSSQ  120
AVQLLNDGQA ASHNLALLLN DGQAASHNLA LGAKHEIVLV FAGTFDSVGT TKLQDAGKAG  180
LVTIQGKNSA VLGTAHICAY LFITLFPDQA EKLLQMSLAR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.127921e-121boll
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2431594e-35AC243159.1 Gossypium hirsutum clone MX146F17-jlq, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2P5R0Q75e-75A0A2P5R0Q7_GOSBA; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM1799626
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.18e-11G2-like family protein