PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D07G2135
Common NameWRKY111
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family WRKY
Protein Properties Length: 331aa    MW: 36945.9 Da    PI: 9.9086
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D07G2135genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.71.9e-31266324360
                  -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
         WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 
                  D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ e+p+++++tYegeHnh+k
  Gh_D07G2135 266 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPSMLIVTYEGEHNHPK 324
                  99***********************9988****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105336.7E-18217262IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.809.5E-34252324IPR003657WRKY domain
PROSITE profilePS5081129.998259325IPR003657WRKY domain
SuperFamilySSF1182902.88E-27262324IPR003657WRKY domain
SMARTSM007741.4E-38264324IPR003657WRKY domain
PfamPF031062.7E-27266323IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MEEVEEANKA AVESCHRVLS LLSQPQDQVH YRNLMAETGE AVFKFKRVVS LLNSSLGHAR  60
ARKLRKLQTP FPQSIFLDYQ RHNPTDYPSK DLQLGYHQEL SSHAKSSLYL GTPCLELSSN  120
GKNPLPLAQQ PPPPAHYHFL HQQRLQLQQH QAEMLSRKSN SGINFNFDSS SCTPTMSSTR  180
SFISSLSIDG SVANMDSGNA FHLIGAPRSS DQGSQHKKKC SGKGEDGSVK CGSSGKCHCS  240
KKRKHRVKRS IKVPAISTKL ADIPPDDYSW RKYGQKPIKG SPHPRGYYKC SSMRGCPARK  300
HVERCLEEPS MLIVTYEGEH NHPKLPSQAT T
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-202603261075WRKY transcription factor 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.210050.0boll
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF6698000.0KF669800.1 Gossypium hirsutum WRKY transcription factor 111 (WRKY111) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001314332.10.0probable WRKY transcription factor 21
RefseqXP_016724987.10.0PREDICTED: probable WRKY transcription factor 21
SwissprotO043361e-133WRK21_ARATH; Probable WRKY transcription factor 21
TrEMBLA0A068LI890.0A0A068LI89_GOSHI; Transcription factor WRKY21
STRINGGorai.013G104500.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM35672861
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.14e-91WRKY DNA-binding protein 21
Publications ? help Back to Top
  1. Dou L, et al.
    Genome-wide analysis of the WRKY gene family in cotton.
    Mol. Genet. Genomics, 2014. 289(6): p. 1103-21
    [PMID:24942461]