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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Gh_D10G0904 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
GRAS |
| Protein Properties |
Length: 517aa MW: 58330.4 Da PI: 5.7449 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_D10G0904 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 302.3 | 1.1e-92 | 160 | 516 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99
e L+++A++++++dl+laq +L rl+++ +sp+g+p+qR+a+yf+eAL++ ++ s p++ +s+++ ++++ a+k fs + Pi+ f h+t+N
Gh_D10G0904 160 EDLIRAANCFDTHDLQLAQVILDRLHQRlRSPSGEPLQRAAFYFKEALQSLFTG--S--TWPNPVRLSSWSEIIQTIEAYKSFSGINPIPMFNHFTTN 253
689************************99************************9..2..2234777788888************************** PP
GRAS 100 qaIleavege.ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
qa+lea++g+ +HiiDfdi+ G+Q+++L++++a+R+ ++ +RiT+v+++e + e++ ++++L++fA++l+++f++++++ ++e++++++++
Gh_D10G0904 254 QALLEALDGSaPLIHIIDFDIGFGGQYASLMREMAERNdHSRKFIRITAVVPEE--YSFETRLIEDNLNQFAQALRLRFQIEFVLLPTFETMSFKAFK 349
**********7889************************556669********66..99*************************9999*********** PP
GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adh.nsesFlerflealeyysalfdsleaklpreseerikvErell 290
+ +gE++a+ l+ +++r l ++++ ++++ ++++sP vvv+v++e ++ +++sF + f+++le+y+++f+sl+a e+ +k+E ll
Gh_D10G0904 350 FINGENTAILLSPSIFRCL--GLQVA----AFVSDLRRISPSVVVFVDSEvwMESgTTTSFRKNFVNCLEFYAMMFESLDAA---GGEWVRKIETLLL 438
******************9..44444....6*******************665666778********************998...689********** PP
GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+++i ++v ++ + + Wre + eaG+++v+ls+ a qa++ll+kv+++g++v +++++lvl+W++ +L+++S+Wr
Gh_D10G0904 439 RPRIFSAVEAAART------AAPAWREVFCEAGMRAVRLSQLADFQAESLLQKVQVRGFHVAKRQAELVLCWHKTALIATSVWR 516
********998887......7899***********************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 517 aa
Download sequence Send
to blast |
MRVPVCSPQG NHYPIPKPDL NNNNITITAG NISFLNSSVP ASSCEPTLDL DLRRSPSSAV 60 TEKPVSNPAD NSNCFSVSGP HQQQAGLEWD EHVLRNMDWD AILKDFGLDD ESVPATKTIP 120 PQVINPRLDN HIQNVPELTS CELTHHPLHS DFNLYESYSE DLIRAANCFD THDLQLAQVI 180 LDRLHQRLRS PSGEPLQRAA FYFKEALQSL FTGSTWPNPV RLSSWSEIIQ TIEAYKSFSG 240 INPIPMFNHF TTNQALLEAL DGSAPLIHII DFDIGFGGQY ASLMREMAER NDHSRKFIRI 300 TAVVPEEYSF ETRLIEDNLN QFAQALRLRF QIEFVLLPTF ETMSFKAFKF INGENTAILL 360 SPSIFRCLGL QVAAFVSDLR RISPSVVVFV DSEVWMESGT TTSFRKNFVN CLEFYAMMFE 420 SLDAAGGEWV RKIETLLLRP RIFSAVEAAA RTAAPAWREV FCEAGMRAVR LSQLADFQAE 480 SLLQKVQVRG FHVAKRQAEL VLCWHKTALI ATSVWRC
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, roots, leaves and flowers. {ECO:0000269|PubMed:18500650}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |