PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D12G1825
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 190aa    MW: 21271.7 Da    PI: 6.9614
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D12G1825genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.11.1e-1496154563
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  kr rr+++NRe+ArrsR RKk++ieeL+  v +L++ N +L ++l +l ++  +  +e+
  Gh_D12G1825  96 KRLRRMISNRESARRSRMRKKQQIEELQSQVNQLQTINGQLSQKLINLLENNHEILQEN 154
                  9*******************************************999988888887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.4E-1692156IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.55394157IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.3E-1396168No hitNo description
PfamPF001702.4E-1396154IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.84E-1296147No hitNo description
CDDcd147026.54E-1997148No hitNo description
PROSITE patternPS00036099114IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MEVPGFDVDG DPQPHGHGSL IQSLFAFCPS QKALTTSATH INMESWDGNS SSSQHPDSGI  60
FSHRLSPNTQ IHLFSPNPSN EDEGRVCQAS IVVDEKRLRR MISNRESARR SRMRKKQQIE  120
ELQSQVNQLQ TINGQLSQKL INLLENNHEI LQENAQLKEK VSTLHMVLSD VFAPLRNSDD  180
SSSMKPKSAS
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.242821e-88ovule
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2431140.0AC243114.1 Gossypium raimondii clone GR__Ba0041F12-jfm, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012438913.11e-136PREDICTED: basic leucine zipper 43-like
RefseqXP_016737700.11e-136PREDICTED: basic leucine zipper 43-like
TrEMBLA0A0D2PXH41e-135A0A0D2PXH4_GOSRA; Uncharacterized protein
TrEMBLA0A1U8NFA61e-135A0A1U8NFA6_GOSHI; basic leucine zipper 43-like
STRINGGorai.008G200600.11e-136(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM61852545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60830.11e-26basic leucine-zipper 70