PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D13G1482
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family G2-like
Protein Properties Length: 89aa    MW: 9396.33 Da    PI: 8.2509
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D13G1482genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like34.16.1e-111213656
      G2-like 36 mkvkgLtlehvkSHLQkYRla 56
                 m+v+gLt+++vkSHLQkYRl+
  Gh_D13G1482  1 MQVDGLTNDEVKSHLQKYRLH 21
                 9******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015576.2E-8121IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.606.1E-10124IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    Send to blast
MQVDGLTNDE VKSHLQKYRL HTRRLPATTT TTTPANQSGL VLGGGHAWMC QDQFGESSKR  60
SSSQSGSPQG PLQLATNTGG TSSTGCESM
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.6881e-141boll
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012463947.15e-50PREDICTED: uncharacterized protein LOC105783193
SwissprotQ9FX842e-15HHO6_ARATH; Transcription factor HHO6
TrEMBLA0A2P5SM607e-58A0A2P5SM60_GOSBA; Uncharacterized protein
STRINGGorai.001G158700.15e-41(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2069636
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68670.14e-11G2-like family protein
Publications ? help Back to Top
  1. Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A
    Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis.
    Plant Cell Physiol., 2016. 57(6): p. 1142-52
    [PMID:27016098]