PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Glyma.01G195800.1.p

Common Name

GLYMA_01G195800, LOC102667230

Organism

Glycine max

Taxonomic ID

3847

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 173aa MW: 19975.5 Da PI: 10.8689

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Glyma.01G195800.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.6	4.1e-11	73	130	5	62
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++ rr+++NRe+ArrsR RK+ +e+L++ v + eN++L + l+ l + +l++e Glyma.01G195800.1.p 73 RKRRRMISNRESARRSRVRKQRHLENLRNQVNLFRVENRELNNGLQFLLHHGNRLRTE 130 6789************************************998887776666666555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.8E-10	69	133	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.381	71	134	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	5.5E-9	73	131	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	4.7E-8	73	146	No hit	No description
SuperFamily	SSF57959	7.74E-11	73	122	No hit	No description
CDD	cd14702	9.05E-15	74	123	No hit	No description
PROSITE pattern	PS00036	0	76	91	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence Send to blast
MLSAISFQGN PFPALEYGFT PWDGLHSLGF KPTSPDPNHV TSSSGSDDPN RTHAEEKLAS 60 DESNRVASIM EERKRRRMIS NRESARRSRV RKQRHLENLR NQVNLFRVEN RELNNGLQFL 120 LHHGNRLRTE NEWLRSERAL LRQKLANINQ LLLFQQLQAF SSAWPCNIVM AE*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	72	76	RKRRR
2	85	91	RRSRVRK
3	85	92	RRSRVRKQ

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Glyma.01G195800.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006573673.1	1e-124	basic leucine zipper 4
TrEMBL	I1J9G7	1e-122	I1J9G7_SOYBN; Uncharacterized protein
STRING	GLYMA01G40370.1	1e-123	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5435	32	54
Representative plant	OGRP8744	8	15

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49760.1	9e-26	basic leucine-zipper 5

Link Out ? help Back to Top
Phytozome	Glyma.01G195800.1.p
Entrez Gene	102667230