PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.02G020300.3.p
Common NameGLYMA_02G020300
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 481aa    MW: 53010 Da    PI: 6.6538
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.02G020300.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.81.4e-30163222159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          ++Dg++WrKYGqK+ kg+++pr+YYrCt + +Cpv+k+v+r+aed +++++tYeg+Hnh+
  Glyma.02G020300.3.p 163 MNDGCHWRKYGQKMAKGNPCPRAYYRCTASpSCPVRKQVQRCAEDMSILITTYEGTHNHP 222
                          58**************************999****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.2E-32149224IPR003657WRKY domain
SuperFamilySSF1182902.75E-27156224IPR003657WRKY domain
PROSITE profilePS5081128.621158224IPR003657WRKY domain
SMARTSM007741.9E-36163223IPR003657WRKY domain
PfamPF031061.1E-26164222IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 481 aa     Download sequence    Send to blast
MGEAREENKM LEFFEILQQD KPEDATNAKG VFSHDEENEE SELVSLSLGI SISKGKPTKD  60
EKILKNKNGI EKTEDEDVHN KRLVLGLDIN LDPVDQDELT ANNSTTESSF VGERGKEEEP  120
TEMWPPSKVL KTMKSVDKSE VSQHDQPKKT RVSIRARCDT QTMNDGCHWR KYGQKMAKGN  180
PCPRAYYRCT ASPSCPVRKQ VQRCAEDMSI LITTYEGTHN HPLPMSATAM ACTTSAAASM  240
LQSPSLSSQH GLVDSAISSI INSSAPYYNP NNALNFSTHQ VSRPQQFYFP NSSISTLNSH  300
PTITLDLTTP PTSSSNSSFT CMPKYSSTNL NFSSGFSPLH SSMPQSPWNS YSGYFNSGTL  360
SQNRHHGGNY MLNTGNQNQP HSLGHLHQPI YMSNNSTISQ HSFPNPIVAA TEAIITSNPK  420
FQSALATALT AYVGNEASGG RLRENHVLEN AELMNLKLLR SENSIGNSSI FPLPLPEQWK  480
*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A7e-21150224174WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.02G020300.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150431e-95AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014619828.10.0probable WRKY transcription factor 61
RefseqXP_028193397.10.0probable WRKY transcription factor 61
TrEMBLA0A445LIE60.0A0A445LIE6_GLYSO; Putative WRKY transcription factor 72 isoform A
STRINGGLYMA02G02430.20.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.16e-48WRKY DNA-binding protein 72