PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.02G026300.2.p
Common NameGLYMA_02G026300
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family MYB_related
Protein Properties Length: 223aa    MW: 24008.4 Da    PI: 10.5726
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.02G026300.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.92.7e-141660347
                         SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                         +WT+eE+ l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
  Glyma.02G026300.2.p 16 PWTEEEHRLFLLGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKY 60
                         8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.0921265IPR017930Myb domain
SMARTSM007171.6E-101363IPR001005SANT/Myb domain
TIGRFAMsTIGR015573.3E-161463IPR006447Myb domain, plants
SuperFamilySSF466894.88E-161564IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.8E-111560IPR009057Homeodomain-like
PfamPF002491.4E-111660IPR001005SANT/Myb domain
CDDcd001673.16E-101661No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MINCDGVFGL LIEGVPWTEE EHRLFLLGLH KVGKGDWRGI SRNFVKTRTP TQVASHAQKY  60
FLRRHNQNRR RRRSSLFDIT TDTVMESSTI MEEEQVPQET MAAPIPAAYP PFPGAGFPMS  120
LSPVVLPVSG ERLTKPIRPT PIVPVPPSSK MANLNLKGKA SRTNLIEPLP LSLNLPSPTP  180
RSQDQSPANS GHSSPSSSSA AAFQAMSAAK FGGGGDSIIS VA*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.126590.0leaf| pod| root| stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.02G026300.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311780.0KT031178.1 Glycine max clone HN_CCL_87 MYB/HD-like transcription factor (Glyma02g03020.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001237761.21e-151MYB transcription factor MYB138
RefseqXP_028194029.11e-151transcription factor MYB1R1-like
TrEMBLA0A445LIT41e-161A0A445LIT4_GLYSO; Transcription factor KUA1 isoform B
TrEMBLI1JBU91e-161I1JBU9_SOYBN; Uncharacterized protein
STRINGGLYMA02G03020.11e-150(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.22e-36MYB_related family protein