PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.02G053100.1.p
Common NameGLYMA_02G053100, LOC100782565
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 376aa    MW: 41879.5 Da    PI: 9.0678
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.02G053100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.70.000472793161254
                          HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          R +++ +++++L++l+ +      +K s a +L +A+ YI+ L
  Glyma.02G053100.1.p 279 RKEKLGDRIQTLQRLVAPF-----GKTSTAYVLSEAIGYIHFL 316
                          6778899*********998.....8***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.614267316IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.32E-10276329IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-7277324IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000830.00138279321No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MEFARFHLQH QLQEESTMCI TSTIPPPDST PSFITNQSWI PSNMYNGYDR GFLTDQCFTN  60
SRELQLKHAM TDSLRISTRQ AFGFHNGKSL ITQHPVSDNN NLFPARIFKG GMINTSMKGM  120
EESSQYSSPS FLSSIGVTGE EFFPNDRPID GGTLSRRYNN NFGDVSLISN LPTLDMASSL  180
VSCSLGLNPK MFDLHTSYGG SCGLIQPCYD TFGLNESISL SHSHMHGREN SPSNSSSKTS  240
SFVSEVATKK RPSNCSLPKE SEAKVKKSRP SCPPLKQVRK EKLGDRIQTL QRLVAPFGKT  300
STAYVLSEAI GYIHFLHQQI QTLSIPYMKS AQSKPSRMVQ LDSNKVDRRE FMPDLRSRGL  360
CLVPLSYASF IHRCV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.02G053100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006574695.10.0transcription factor bHLH111 isoform X1
TrEMBLA0A0R0KXN80.0A0A0R0KXN8_SOYBN; Uncharacterized protein
STRINGGLYMA02G05971.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40453254
Representative plantOGRP1021979
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.15e-33bHLH family protein