PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.02G282900.1.p
Common NameGLYMA_02G282900, LOC102661690
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 214aa    MW: 24064.2 Da    PI: 7.2733
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.02G282900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.91.5e-301871255
              G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                         prlrWtpeLH++Fvea+++LGGs+kAtPk+il+ m vkgL ++h+kSHLQ+YR 
  Glyma.02G282900.1.p 18 PRLRWTPELHQHFVEAIQSLGGSHKATPKRILQQMRVKGLRIAHIKSHLQMYRN 71
                         8****************************************************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.7051474IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.6E-271572IPR009057Homeodomain-like
SuperFamilySSF466898.24E-141871IPR009057Homeodomain-like
TIGRFAMsTIGR015572.0E-231872IPR006447Myb domain, plants
PfamPF002493.1E-81970IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MKNSERSSVR KYNKSELPRL RWTPELHQHF VEAIQSLGGS HKATPKRILQ QMRVKGLRIA  60
HIKSHLQMYR NMKGHAIVAP VDQLLEGKAK DFKICSNICP TERNLKRELH LLDYKDGLSQ  120
TSEETDYDLN QEPQSSAVLL LSDDVSNEEE NFADLSLISF SMPLISMMQS ENNKEIMRFS  180
SSTAAAAANH SVVDSSSSTP SFANNYINLD LTI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A7e-201973458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B7e-201973458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A7e-201973458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C7e-201973458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D7e-201973458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F7e-201973458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H7e-201973458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J7e-201973458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.02G282900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006575636.11e-158putative Myb family transcription factor At1g14600
TrEMBLK7KBA01e-157K7KBA0_SOYBN; Uncharacterized protein
STRINGGLYMA02G45231.11e-158(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF91862839
Representative plantOGRP28515123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.13e-25G2-like family protein