PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.03G002300.1.p
Common NameGLYMA_03G002300
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 236aa    MW: 26757.9 Da    PI: 4.5915
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.03G002300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY36.69.3e-12951352259
                          EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY  22 rsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                           sYYrCt++   +C+++k+v+r +edp + ++tY ++H+++
  Glyma.03G002300.1.p  95 MSYYRCTHKydqNCQATKQVQRIQEDPPLYKTTYLSHHTCN 135
                          59******9999***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031069.7E-1195134IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.5E-1095135IPR003657WRKY domain
SuperFamilySSF1182908.63E-1295135IPR003657WRKY domain
PROSITE profilePS508119.9796132IPR003657WRKY domain
SMARTSM007741.8E-896136IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MDDRKVLEEL VRGLEFANQL RQVMINGKDN ESSATTTTPF VQSLVKNVFR SFTNTLFLLD  60
KYPSYEVSHT TKSEDSQESC KCMQLIQSQT ITIIMSYYRC THKYDQNCQA TKQVQRIQED  120
PPLYKTTYLS HHTCNDLLNY EIIPDSNNNS PSDTSILLSF NNTFPTPTKQ ECPFLSSFPS  180
PISVKKLEEV IPASSSRHNN NVTLPPPDPW DVMSNSAMCD SVGLDDVNLF LDFDD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.03G002300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0956450.0BT095645.1 Soybean clone JCVI-FLGm-15G11 unknown mRNA.
GenBankKT0312290.0KT031229.1 Glycine max clone HN_CCL_115 WRKY transcription factor (Glyma03g00460.1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028223931.11e-155probable WRKY transcription factor 70 isoform X2
TrEMBLA0A0R0KI041e-173A0A0R0KI04_SOYBN; Uncharacterized protein
STRINGGLYMA03G00460.11e-155(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66550.26e-20WRKY DNA-binding protein 67