PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.03G003500.4.p
Common NameGLYMA_03G003500, LOC100787389
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 224aa    MW: 24571.5 Da    PI: 5.3633
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.03G003500.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like50.25.6e-1618462755
              G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55
                         AtPk +l++m+v+gLt++hvkSHLQkYRl
  Glyma.03G003500.4.p 18 ATPKGVLRVMGVPGLTIYHVKSHLQKYRL 46
                         9***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.0E-151847IPR009057Homeodomain-like
SuperFamilySSF466892.69E-61846IPR009057Homeodomain-like
TIGRFAMsTIGR015574.0E-111847IPR006447Myb domain, plants
PfamPF143796.9E-2580126IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MTVLSMPLHN LVDQIVGATP KGVLRVMGVP GLTIYHVKSH LQKYRLAKYL PESPADGKDS  60
KVEKRNSGDS ISGADSSPGM PINDALRMQM EVQKRLHEQL EVQKQLQMRI EAQGKYLQKI  120
IEEQQKLGSN LTTSEALPLS HDEQNHPQSE ASGSSEALAS TVSPLKKQRI DDGSKDGFTA  180
SQVRNAAQKN DCNVGQLDPN LYDDAGFEFD LETKKDEDNE SGQ*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.578180.0cotyledon| leaf
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.03G003500.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ0073110.0HQ007311.1 Glycine max cultivar Jidou11 MYB transcription factor (PHR1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014628879.11e-164MYB-CC domain-containing transcription factor PHR7 isoform X3
RefseqXP_028223946.11e-164myb family transcription factor PHL7-like isoform X3
SwissprotQ9SJW04e-52PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLK7KBW51e-163K7KBW5_SOYBN; Uncharacterized protein
STRINGGLYMA03G00590.21e-149(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.13e-54G2-like family protein