PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.03G067000.1.p
Common NameGLYMA_03G067000
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family MYB_related
Protein Properties Length: 216aa    MW: 24218.8 Da    PI: 9.8706
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.03G067000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.94e-07136179447
                          S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          W +e +  +v + +++  g Wk I++++  ++t+ q+ s+ qky
  Glyma.03G067000.1.p 136 WIKEGHRSFVLGLEKYEHGGWKNISKKFVPTKTPTQVASHAQKY 179
                          667778999999*****************9*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466895.47E-13131184IPR009057Homeodomain-like
TIGRFAMsTIGR015574.0E-11132183IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.8E-5135180IPR009057Homeodomain-like
CDDcd001673.41E-4136180No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MQLEVLALAP STYEVPVILA PTTSPIVDAP TKVLALAIDE RVLGHTALAP QRVYTFLDLV  60
PVLSAHTTHV CAPQRVFASQ VPAKSLEQTL NSIAFEQVHV PISYQHHLLS HNTKSNSIKL  120
FGDSSRSVHC NKYTHWIKEG HRSFVLGLEK YEHGGWKNIS KKFVPTKTPT QVASHAQKYF  180
ERKKAPKKEK KRRSIHDTTL EDIDMIVTPH IDQHN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.03G067000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028220306.12e-59transcription factor DIVARICATA-like
TrEMBLA0A0R0KPZ91e-157A0A0R0KPZ9_SOYBN; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13860414
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05790.11e-18MYB family protein