PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.03G128200.1.p
Common NameGLYMA_03G128200
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 291aa    MW: 32365.9 Da    PI: 8.8434
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.03G128200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.63.5e-101541733
                         HHCHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  7 errkqkNReAArrsRqRKkaeieeLee 33
                          rr+++NReAAr+sR+RK a++++Le 
  Glyma.03G128200.1.p 15 LRRLAQNREAARKSRLRKMAYVQQLES 41
                         59***********************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF001702.9E-71541IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.49E-61542No hitNo description
Gene3DG3DSA:1.20.5.1704.9E-71641No hitNo description
PROSITE patternPS0003601631IPR004827Basic-leucine zipper domain
PfamPF141445.9E-2989163IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MGSAETLKGR VQHTLRRLAQ NREAARKSRL RKMAYVQQLE SSRLKLISPA GLGIFISSTG  60
DQAQSMNGNG AMAFDVEYAR WLEEHNRQTN ELRTAINSHA GDIELRTIVD NFVTQFNDIF  120
RLKAIAAKAD SCQILSGMWK TPAERCFMWI GGFRPSELFK LLLSQLEPLV EQQMDIYSFQ  180
QSCQQAEEAL SQGMDALQQS VSETLANGSP SSSGSPGNVA NNMGQITMAM GKLGTLEGFL  240
LQADNLRQRT LEVMLQILTT RQSARALLAI SDYFSRLREL GSLWPSRPRE *
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.03G128200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF4026090.0AF402609.1 Phaseolus vulgaris TGA-type basic leucine zipper protein TGA2.2 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006576785.11e-167transcription factor TGA2.3
RefseqXP_006576786.11e-167transcription factor TGA2.3
RefseqXP_028225203.11e-167transcription factor TGA2.3-like
RefseqXP_028225204.11e-167transcription factor TGA2.3-like
RefseqXP_028225205.11e-167transcription factor TGA2.3-like
SwissprotO241601e-138TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A445LAX20.0A0A445LAX2_GLYSO; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLK7KEP50.0K7KEP5_SOYBN; Uncharacterized protein
STRINGGLYMA03G28400.30.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP7221667
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.51e-127TGACG motif-binding factor 6