PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.03G140800.1.p
Common NameGLYMA_03G140800
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 223aa    MW: 24803.4 Da    PI: 4.2765
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.03G140800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.15.7e-102674153
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53
                         s+y+GV +d+++ +W+A    +++   +  + slg f+t+eeAa+a++    +l
  Glyma.03G140800.1.p 26 SKYRGVIRDSSTAKWEAI---FVTS--SdDNKSLGLFDTEEEAARAYDVESIRL 74
                         89****99**********...8773..2499****************9766665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.3E-72669IPR001471AP2/ERF domain
CDDcd000182.49E-152685No hitNo description
SuperFamilySSF541714.71E-132686IPR016177DNA-binding domain
SMARTSM003804.4E-122790IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.9E-122784IPR001471AP2/ERF domain
PROSITE profilePS5103214.3282784IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MSTDMTQTDV VDSVRMLSYS FVKFISKYRG VIRDSSTAKW EAIFVTSSDD NKSLGLFDTE  60
EEAARAYDVE SIRLKGYDAI TNFNIRFYNV EAILKGVTDP EKVIYQSQDT VPVEAMQPLE  120
VLQNIIDQGS SKMLYGTTTD TFGSNVFQRP ISGNTEEQEN YVAFASQGRE NDPNRNLSLV  180
TEGQPLVYGR SGEDDGQGGS SASSMCFEDE LTNAYKKFIK RS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.03G140800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014629255.21e-162AP2-like ethylene-responsive transcription factor BBM
TrEMBLA0A445LBQ81e-161A0A445LBQ8_GLYSO; AP2-like ethylene-responsive transcription factor PLT2 isoform A
TrEMBLK7KEZ41e-162K7KEZ4_SOYBN; Uncharacterized protein
STRINGGLYMA03G29681.11e-163(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3520422
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51190.12e-19AP2 family protein