PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Glyma.03G143500.2.p

Common Name

GLYMA_03G143500

Organism

Glycine max

Taxonomic ID

3847

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

G2-like

Protein Properties

Length: 304aa MW: 34331.7 Da PI: 8.1061

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Glyma.03G143500.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	73.1	4e-23	223	274	1	52
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 k r++Wt++LHe F+ v++LGG+ekA Pk+il++mk + L+++hvkSHLQk Glyma.03G143500.2.p 223 KRRIKWTKDLHEPFMMIVNSLGGPEKAKPKAILDMMKSDLLSISHVKSHLQK 274 689************************************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.5E-19	221	274	IPR009057	Homeodomain-like
SuperFamily	SSF46689	2.51E-10	222	275	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.1E-17	223	274	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence Send to blast
MYQYSSQLYG TEWESYMGIS NLDKVVGSEQ LSFEPTKSPF NIVTTPLQIT PPGFCASAIK 60 SLVSFQAQQQ QQHAHHQHQI EVPAAWCFEF PKTTTTTDTH MVMNNICQAS GDNFTTKQDR 120 PSSQFTSSFL SSSGADCRSS SEKYCKIASY SEEKHSSIQP DSIQYYDLYS QEDDKLLRDD 180 AATDEGPLEI SFQRNQLDSC TKREKQAPHR TCGVACVASR RGKRRIKWTK DLHEPFMMIV 240 NSLGGPEKAK PKAILDMMKS DLLSISHVKS HLQKDLRKDR ELMGCLSFKS KSICKLRNHG 300 NYN*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-15	222	274	1	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-15	222	274	1	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-15	222	274	1	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-15	222	274	1	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-15	222	274	1	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-15	222	274	1	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-15	222	274	1	53	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-15	222	274	1	53	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Glyma.03G143500.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006576853.1	0.0	protein PHOSPHATE STARVATION RESPONSE 3
Refseq	XP_028225378.1	0.0	protein PHOSPHATE STARVATION RESPONSE 3-like
TrEMBL	A0A0R0KJ73	0.0	A0A0R0KJ73_SOYBN; Uncharacterized protein
STRING	GLYMA03G29935.1	0.0	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.2	3e-16	G2-like family protein

Link Out ? help Back to Top
Phytozome	Glyma.03G143500.2.p