PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.03G255000.7.p
Common NameGLYMA_03G255000
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 375aa    MW: 39913.3 Da    PI: 8.9872
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.03G255000.7.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_170.82e-22229291163
                          XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L aeN +Lk+e+++l++ ++k++ e+
  Glyma.03G255000.7.p 229 ERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNAENATLKSEINRLTESSEKMRVEN 291
                          89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.6E-17150IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165968.3E-2783212No hitNo description
Gene3DG3DSA:1.20.5.1704.0E-17224288No hitNo description
PfamPF001702.8E-20229291IPR004827Basic-leucine zipper domain
SMARTSM003382.6E-21229293IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.415231294IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-11232287No hitNo description
CDDcd147024.77E-21234282No hitNo description
PROSITE patternPS000360236251IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MPPYYNSAVA SGHAPHPYMW GPPQPMMPPY GPPYAAIYPH GGVYTHPAVP IGPLTHSQGV  60
PSSPAAGTPL SIETPPKSSG NTDQGLMKKL KEFDGLAMSI GNGHAESAER GGENRLSQSV  120
DTEGSSDGSD GNTSGANQSR RKRSREGTPT TDGEGKTEIQ GSPISKETAA SNKMLGVVPA  180
SVAGTIVGHV VSSGMTTALE LRNPSSVHSK TSAPQPCPVL PAEAWVQNER ELKRERRKQS  240
NRESARRSRL RKQAETEELA RKVESLNAEN ATLKSEINRL TESSEKMRVE NATLRGKLKN  300
AQLGQTQEIT LKIIDSQRAT PVSTENLLSR VNNSGSNDRT VEDENGFCEN KPNSGAKLHQ  360
LLDTSPRADA VAAG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1245251RRSRLRK
2245252RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.328760.0cotyledon| epicotyl| hypocotyl| leaf
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.03G255000.7.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311450.0KT031145.1 Glycine max clone HN_CCL_210 BZIP transcription factor (Glyma19g44190.2) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001336229.10.0bZIP transcription factor bZIP77 isoform 2
RefseqXP_028226824.10.0common plant regulatory factor 1-like isoform X2
SwissprotQ990891e-128CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A0B2RQK00.0A0A0B2RQK0_GLYSO; Common plant regulatory factor 1
TrEMBLA0A445LH210.0A0A445LH21_GLYSO; Uncharacterized protein
TrEMBLI1JRW90.0I1JRW9_SOYBN; Uncharacterized protein
TrEMBLI1JRX10.0I1JRX1_SOYBN; Uncharacterized protein
TrEMBLK7KH190.0K7KH19_SOYBN; Uncharacterized protein
STRINGGLYMA03G41590.50.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.18e-82G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]