PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.04G029600.1.p
Common NamebZIP44, GLYMA_04G029600
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 154aa    MW: 17364.4 Da    PI: 9.1634
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.04G029600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.64.9e-123593563
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                         ++ +rkq+NRe+ArrsR RK+  +++L++   +L + N +   +++  ++++ ++++e+
  Glyma.04G029600.1.p 35 RKNKRKQSNRESARRSRMRKRNHLDQLTKQLSQLAKNNGEILATIDITTQHYLNVEAEN 93
                         689******************************************99999999888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.7E-153195IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.0E-932110No hitNo description
PROSITE profilePS5021710.223396IPR004827Basic-leucine zipper domain
PfamPF001707.1E-93586IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.19E-103588No hitNo description
CDDcd147024.37E-143686No hitNo description
PROSITE patternPS0003603853IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
MSMSMASSSG NSSISTKSQS SGSEGDLQVV ITDERKNKRK QSNRESARRS RMRKRNHLDQ  60
LTKQLSQLAK NNGEILATID ITTQHYLNVE AENSILRAQM GELSQRLQSL NDIVHDIIIN  120
TTTTYERDCY LTSAQNFTTT TYTLCLNQPV FQW*
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in the micropylar endosperm and radicle tip in early germinating seeds. {ECO:0000269|PubMed:23461773}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Function -- GeneRIF ? help Back to Top
  1. negative regulator of abscisic acid signaling and functions in salt and freezing tolerance
    [PMID: 18365246]
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.04G029600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0927420.0BT092742.1 Soybean clone JCVI-FLGm-11L19 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001237929.11e-109bZIP transcription factor bZIP44
SwissprotC0Z2L52e-37BZP44_ARATH; bZIP transcription factor 44
TrEMBLQ0GPI21e-108Q0GPI2_SOYBN; BZIP transcription factor bZIP44
STRINGGLYMA04G03200.11e-109(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2014845
Representative plantOGRP5511678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-23basic leucine-zipper 44
Publications ? help Back to Top
  1. Liao Y, et al.
    Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis.
    Planta, 2008. 228(2): p. 225-40
    [PMID:18365246]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  3. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]