PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.04G178700.1.p
Common NameGLYMA_04G178700
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 151aa    MW: 17662.3 Da    PI: 7.1797
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.04G178700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.12e-053054630
                         HHHHHHHHHHHHHHHHHHHCTSCCC CS
                  HLH  6 nerErrRRdriNsafeeLrellPka 30
                         +e+E++RR+++ ++ +eL++++ ++
  Glyma.04G178700.1.p 30 SEIEKKRRKDVEEKVQELKSVIKEL 54
                         79******************99765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF006576.3E-933137IPR001087GDSL lipase/esterase
Gene3DG3DSA:3.40.50.11108.0E-1238139IPR013830SGNH hydrolase-type esterase domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016788Molecular Functionhydrolase activity, acting on ester bonds
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MIQTLFNWLS TSENLLVSIQ EKIKWADAMS EIEKKRRKDV EEKVQELKSV IKELIEEGAI  60
KLVVPKNFLI GCNSVVLATL NSDKKDDYDQ FGCLKTYNTF IEYYNEQIKK AIETLRQKYS  120
YFDNYGATKR LFQAPQQYGG LCFYFLFLHE *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13337KKRRK
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.148041e-71cotyledon| leaf| meristem| root| stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.04G178700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0992773e-69BT099277.1 Soybean clone JCVI-FLGm-23D10 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025983920.11e-107GDSL esterase/lipase At1g28590-like
TrEMBLA0A0R0KG451e-106A0A0R0KG45_SOYBN; Uncharacterized protein
STRINGGLYMA04G34912.16e-56(Glycine max)