 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Glyma.05G103400.2.p |
| Common Name | GLYMA_05G103400 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
GRAS |
| Protein Properties |
Length: 425aa MW: 47230.8 Da PI: 5.7098 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.05G103400.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 291.3 | 2.7e-89 | 2 | 421 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.sseelaalkl..fsevs 88
++lL++cA+a++++d +laq++L+ l+++a pdgd++qRla+ f++AL ar a+ ++++k l p ++ + ++++++ +l f++++
Glyma.05G103400.2.p 2 EQLLVHCANAIETNDVTLAQQILWVLNNIAPPDGDSNQRLASGFLRALTARAAK--TGTCKMLVPAGGTNLSiDTHRFNVIELanFVDLT 89
79****************************************************..88888887766654443666666767689***** PP
GRAS 89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesg......skeeleetgerLakfA 169
P+++f++ +aN aIlea+eg + +Hi+D+++++++Q p+L +a+asR+ +pp +++T+ ++++ ++ e+g +L +fA
Glyma.05G103400.2.p 90 PWHRFGFTAANAAILEATEGFSVIHIVDLSLTHCMQIPTLVDAIASRNyheVPPPIIKLTVAADASFRdnippmLDLSYDELGAKLVNFA 179
************************************************8888899********97765888987778999********** PP
GRAS 170 eelgvpfefnvl.......vakrledleleeLrvkp.............gEalaVnlvlqlhrll......................... 214
++ ++ +ef+v+ + +e+Lrv++ Eal++n++++lh+++
Glyma.05G103400.2.p 180 RSRNMVMEFRVVsssyrdgF----AG-LIEHLRVQQqhfvyaaesrttpSEALVINCHMMLHYIPdetlsdttgltsflydssslaassa 264
***********855533331....22.3566655555555555666666*************************************9985 PP
GRAS 215 desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegae 304
+ ++++s r+ +Lk +++l P+vv++v+++ad++s++++ r+ +a++y + +d++++ lpr s++r+++E+ + ++i+nv+a+eg +
Glyma.05G103400.2.p 265 VSVTPTSSLRSLFLKSLRGLDPTVVILVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAD-ICWKIENVIAHEGVQ 353
33444555899***************************************************************.*************** PP
GRAS 305 rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
r+er e +++W++r+++a F+ v++se+ ++++k++l +++ g+ +++e++ +vl+Wk++++v++SaW
Glyma.05G103400.2.p 354 RVERVEPKNRWEQRMKNASFQGVAFSEDSVAEVKAMLDEHA-AGWGLKKEDEHIVLTWKGHNVVFASAW 421
*****************************************.999************************ PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 425 aa
Download sequence Send
to blast |
MEQLLVHCAN AIETNDVTLA QQILWVLNNI APPDGDSNQR LASGFLRALT ARAAKTGTCK 60
MLVPAGGTNL SIDTHRFNVI ELANFVDLTP WHRFGFTAAN AAILEATEGF SVIHIVDLSL 120
THCMQIPTLV DAIASRNYHE VPPPIIKLTV AADASFRDNI PPMLDLSYDE LGAKLVNFAR 180
SRNMVMEFRV VSSSYRDGFA GLIEHLRVQQ QHFVYAAESR TTPSEALVIN CHMMLHYIPD 240
ETLSDTTGLT SFLYDSSSLA ASSAVSVTPT SSLRSLFLKS LRGLDPTVVI LVDEDADLTS 300
NNLVCRLRSA FNYLWIPYDT VDTFLPRGSK QRQWYEADIC WKIENVIAHE GVQRVERVEP 360
KNRWEQRMKN ASFQGVAFSE DSVAEVKAML DEHAAGWGLK KEDEHIVLTW KGHNVVFASA 420
WLPA*
|
| Expression --
Description ? help
Back to Top |
| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, leaves and flowers. {ECO:0000269|PubMed:18500650}. |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
