PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.05G108200.1.p
Common NameGLYMA_05G108200
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 181aa    MW: 20904.5 Da    PI: 10.7603
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.05G108200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.24.1e-0969113549
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                          ++ rr+++NRe+ArrsR RK+  +e+L++   +   eN++L ++l
  Glyma.05G108200.1.p  69 RKRRRMISNRESARRSRMRKQRHLENLRNQLNKCRVENRELGNRL 113
                          67899**********************************998776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.4E-1265129IPR004827Basic-leucine zipper domain
PfamPF077161.8E-467113IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.33567130IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.57E-1069120No hitNo description
Gene3DG3DSA:1.20.5.1701.9E-869123No hitNo description
CDDcd147021.16E-1570121No hitNo description
PROSITE patternPS0003607287IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MLSALTPSDP FSPFSPFSAG FTPWDDNDDS HALFSPKPVS ASSSASDYKS EPNPTEHVCA  60
SSSVMMDERK RRRMISNRES ARRSRMRKQR HLENLRNQLN KCRVENRELG NRLQFFLHHL  120
NRLRTENEWL RSERTLLRQK VANLTQILIF QQFQTTFSPA AWTTCTNNNT TSLMTINQVN  180
*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16872RKRRR
28188RRSRMRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.352130.0leaf
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.05G108200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2351910.0AC235191.1 Glycine max strain Williams 82 clone GM_WBb0012A18, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001237353.21e-131bZIP transcription factor bZIP72
RefseqXP_028232226.11e-131basic leucine zipper 4-like
TrEMBLA0A445KM091e-129A0A445KM09_GLYSO; BZIP transcription factor 2
TrEMBLI1K2G21e-129I1K2G2_SOYBN; Uncharacterized protein
STRINGGLYMA05G22860.11e-130(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Representative plantOGRP8744815
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37730.12e-23basic leucine-zipper 7