PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.05G122400.1.p
Common NameGLYMA_05G122400
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 225aa    MW: 24619.9 Da    PI: 9.7695
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.05G122400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.12.1e-14140197259
                          XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                          + l++ rr++kNRe+A rsR+RK+a++ eLe  v +Le+eN +L ke  e++ + +k+
  Glyma.05G122400.1.p 140 ATLQKLRRMIKNRESAARSRERKQAYTSELEYLVHQLEQENARLLKEEAEMRRQRKKH 197
                          57899***************************************99988888777765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.7E-14139203IPR004827Basic-leucine zipper domain
PfamPF001701.1E-12140195IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.174141193IPR004827Basic-leucine zipper domain
CDDcd147073.70E-18143190No hitNo description
SuperFamilySSF579591.75E-10143194No hitNo description
Gene3DG3DSA:1.20.5.1701.5E-13144195No hitNo description
PROSITE patternPS000360146161IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MASSKLVSTN PDLPRDPSSS SSSSSSISPL SSLLSDLHPM DDLLKSITPN SVDDFWKGIA  60
AASTDNAGGV TLEDFLTKAI PVTEEDVRGA PPPPPSFLPF PAEGSSSSVE PFANNGVGSA  120
PSNSVQKGKR RAVEEPVDKA TLQKLRRMIK NRESAARSRE RKQAYTSELE YLVHQLEQEN  180
ARLLKEEAEM RRQRKKHLFE CIIPIEVMPK PKKKLRRVNS AQSL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1209215KPKKKLR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.286820.0hypocotyl
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.05G122400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006579488.11e-161bZIP transcription factor bZIP9 isoform X1
RefseqXP_028232363.11e-161bZIP transcription factor 12-like isoform X1
TrEMBLA0A445KMZ31e-160A0A445KMZ3_GLYSO; BZIP transcription factor 12 isoform A
TrEMBLK7KPT91e-160K7KPT9_SOYBN; Uncharacterized protein
STRINGGLYMA05G25200.31e-161(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Representative plantOGRP8662715
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03970.12e-26G-box binding factor 4
Publications ? help Back to Top
  1. Liao Y, et al.
    Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis.
    Planta, 2008. 228(2): p. 225-40
    [PMID:18365246]