PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.05G122400.2.p
Common NameGLYMA_05G122400
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 215aa    MW: 23298.3 Da    PI: 7.5183
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.05G122400.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.44.1e-15140186248
                          XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                          + l++ rr++kNRe+A rsR+RK+a++ eLe  v +Le+eN +L ke
  Glyma.05G122400.2.p 140 ATLQKLRRMIKNRESAARSRERKQAYTSELEYLVHQLEQENARLLKE 186
                          57899**************************************9886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.7E-11139211IPR004827Basic-leucine zipper domain
PfamPF001705.3E-14140186IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.507141186IPR004827Basic-leucine zipper domain
CDDcd147078.29E-19143185No hitNo description
SuperFamilySSF579595.63E-11143186No hitNo description
Gene3DG3DSA:1.20.5.1707.0E-14144186No hitNo description
PROSITE patternPS000360146161IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
MASSKLVSTN PDLPRDPSSS SSSSSSISPL SSLLSDLHPM DDLLKSITPN SVDDFWKGIA  60
AASTDNAGGV TLEDFLTKAI PVTEEDVRGA PPPPPSFLPF PAEGSSSSVE PFANNGVGSA  120
PSNSVQKGKR RAVEEPVDKA TLQKLRRMIK NRESAARSRE RKQAYTSELE YLVHQLEQEN  180
ARLLKEELFE CIIPIEVMPK PKKKLRRVNS AQSL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1199205KPKKKLR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.286820.0hypocotyl
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.05G122400.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001345588.11e-153bZIP transcription factor bZIP9 isoform 1
RefseqXP_028232364.11e-153bZIP transcription factor 12-like isoform X2
TrEMBLA0A445KMJ71e-152A0A445KMJ7_GLYSO; BZIP transcription factor 12 isoform B
TrEMBLI1K2U21e-152I1K2U2_SOYBN; Uncharacterized protein
STRINGGLYMA05G25200.31e-124(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.31e-23bZIP family protein
Publications ? help Back to Top
  1. Liao Y, et al.
    Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis.
    Planta, 2008. 228(2): p. 225-40
    [PMID:18365246]