PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.05G122400.3.p
Common NameGLYMA_05G122400
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 211aa    MW: 22905.7 Da    PI: 8.4813
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.05G122400.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.51.6e-14140196258
                          XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                          + l++ rr++kNRe+A rsR+RK+a++ eLe  v +Le+eN +L ke  e++ + +k
  Glyma.05G122400.3.p 140 ATLQKLRRMIKNRESAARSRERKQAYTSELEYLVHQLEQENARLLKEEAEMRRQRKK 196
                          57899**************************************99987777766655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.5E-12139203IPR004827Basic-leucine zipper domain
PfamPF001701.6E-12140195IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.174141193IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.38E-11143194No hitNo description
CDDcd147072.09E-18143190No hitNo description
Gene3DG3DSA:1.20.5.1701.7E-13144195No hitNo description
PROSITE patternPS000360146161IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MASSKLVSTN PDLPRDPSSS SSSSSSISPL SSLLSDLHPM DDLLKSITPN SVDDFWKGIA  60
AASTDNAGGV TLEDFLTKAI PVTEEDVRGA PPPPPSFLPF PAEGSSSSVE PFANNGVGSA  120
PSNSVQKGKR RAVEEPVDKA TLQKLRRMIK NRESAARSRE RKQAYTSELE YLVHQLEQEN  180
ARLLKEEAEM RRQRKKHVCT ISLSASFQLR *
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.286820.0hypocotyl
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.05G122400.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028232365.11e-151bZIP transcription factor 12-like isoform X3
TrEMBLK7KPU01e-150K7KPU0_SOYBN; Uncharacterized protein
STRINGGLYMA05G25200.31e-140(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03970.13e-21G-box binding factor 4