PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.05G168100.2.p
Common NameGLYMA_05G168100
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 273aa    MW: 30901.2 Da    PI: 7.2372
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.05G168100.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.62.6e-081411871763
                          HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          A+rsR RK+++i+eLe+ v++L+ae ++   ele l+++   l +e+
  Glyma.05G168100.2.p 141 AQRSRVRKLQYIAELERNVQVLQAEGSEVSAELEFLNQQNLILSMEN 187
                          89***********************************9998888776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.3E-4130189IPR004827Basic-leucine zipper domain
CDDcd147033.77E-15132180No hitNo description
SuperFamilySSF579599.57E-6140182No hitNo description
Gene3DG3DSA:1.20.5.1702.5E-7141184No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MISLTSQRHL SEEDEYKYKN MMSIPSWSSQ DFDRSKDARH VPVYAEMNSV KQKNRSWDSF  60
SNAMTNPVGV PSGKDSAAFQ SSGLQCTPHE ADGLPPASSE KHDSVESGLQ DAKPFPEKKD  120
SSHAKSSASE TDTKRAKQQF AQRSRVRKLQ YIAELERNVQ VLQAEGSEVS AELEFLNQQN  180
LILSMENKAL KQRLENIAQE QLIKYLEQEV LEREIGRLRA LYQQQQQPQT QPQQQPSGSH  240
RRTNSRDLES QFANLSLKHK DTNSGQDPAL RI*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.47310.0cotyledon| leaf| root| seed coat| somatic embryo| stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.05G168100.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2353040.0AC235304.1 Glycine max strain Williams 82 clone GM_WBb0065N07, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003525005.11e-177uncharacterized protein At4g06598
RefseqXP_014631213.11e-177uncharacterized protein At4g06598
RefseqXP_028232969.11e-177uncharacterized protein At4g06598-like
RefseqXP_028232970.11e-177uncharacterized protein At4g06598-like
TrEMBLA0A0R0K1Q30.0A0A0R0K1Q3_SOYBN; Uncharacterized protein
STRINGGLYMA05G30170.31e-177(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.22e-64bZIP family protein