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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Glyma.06G213100.1.p |
| Common Name | GLYMA_06G213100, LOC100814551 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
GRAS |
| Protein Properties |
Length: 506aa MW: 56288.3 Da PI: 4.8373 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.06G213100.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 423.6 | 1.6e-129 | 124 | 491 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlsel.aspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88
lv++L++cA+ v+ gdl+ a +l+++++ l a + + ++a yf AL++r+++ ++++++l++s+ + e ++ ++e++
Glyma.06G213100.1.p 124 LVHTLMTCADSVQRGDLAFAGSLIENMQGLlAHVNTnIGIGKVAGYFIDALRRRILG--QGVFQTLSSSSYP----YEDNVLYHHYYEAC 207
689*************************995333332699****************9..9999999888887....566677889***** PP
GRAS 89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfef 178
P+lkf+h+taNqaIlea++g+++vH+iDf+++qGlQWpaL+qaLa Rp+gpp lR+Tg+g+p+s+++++l+e+g rLa++A++++v+f f
Glyma.06G213100.1.p 208 PYLKFAHFTANQAILEAFNGHDCVHVIDFNLMQGLQWPALIQALALRPGGPPLLRLTGIGPPSSDNRDTLREIGLRLAELARSVNVRFAF 297
****************************************************************************************** PP
GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesv.sleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysal 267
+ ++a rled+++++L+v+p+Ea+aVn+++qlhrll+++ ++ s +++vL ++sl+Pk++ vveqea+hn+ +Flerf+eal+yys++
Glyma.06G213100.1.p 298 RGVAAWRLEDVKPWMLQVNPNEAVAVNSIMQLHRLLASDSdPIGSGIETVLGWIRSLNPKIISVVEQEANHNQDRFLERFTEALHYYSTV 387
**9888*****************************98655167779******************************************** PP
GRAS 268 fdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgs 357
fdslea e ++ + +++l+rei+nvv+ eg +r+erhe l+kWrerle+aGFkp++l+++a+kqa++ll ++ +gy+vee++g+
Glyma.06G213100.1.p 388 FDSLEAC---PVEPDKALAEMYLQREICNVVSSEGPARVERHEPLAKWRERLEKAGFKPLHLGSNAYKQASMLLTLFSAEGYSVEENQGC 474
****999...467777888999******************************************************************** PP
GRAS 358 lvlgWkdrpLvsvSaWr 374
l+lgW++rpL+++SaW+
Glyma.06G213100.1.p 475 LTLGWHSRPLIAASAWQ 491
****************6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0009863 | Biological Process | salicylic acid mediated signaling pathway |
| GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
| GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0042538 | Biological Process | hyperosmotic salinity response |
| GO:2000033 | Biological Process | regulation of seed dormancy process |
| GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 506 aa
Download sequence Send
to blast |
MASSSSNGSS SGSKSWDIDG DLAGFGYKVR SSELQHVAEN MERLENVMDI VNSSTNNNIS 60
QLASDTVFYN PSDIGSWVDT LLSEFDQTAS LPYDFSDFLD LDTDQNQNHK PTLVTMEEDS 120
GIRLVHTLMT CADSVQRGDL AFAGSLIENM QGLLAHVNTN IGIGKVAGYF IDALRRRILG 180
QGVFQTLSSS SYPYEDNVLY HHYYEACPYL KFAHFTANQA ILEAFNGHDC VHVIDFNLMQ 240
GLQWPALIQA LALRPGGPPL LRLTGIGPPS SDNRDTLREI GLRLAELARS VNVRFAFRGV 300
AAWRLEDVKP WMLQVNPNEA VAVNSIMQLH RLLASDSDPI GSGIETVLGW IRSLNPKIIS 360
VVEQEANHNQ DRFLERFTEA LHYYSTVFDS LEACPVEPDK ALAEMYLQRE ICNVVSSEGP 420
ARVERHEPLA KWRERLEKAG FKPLHLGSNA YKQASMLLTL FSAEGYSVEE NQGCLTLGWH 480
SRPLIAASAW QAAPMQDRET LRFEQ*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that represses transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). {ECO:0000250}. |
