PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G060400.3.p
Common NameGLYMA_07G060400, LOC100820423
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 353aa    MW: 37711.6 Da    PI: 7.54
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G060400.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.79.7e-22207269163
                          XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv+ L+aeN +Lk+e+ +l++ ++++++e+
  Glyma.07G060400.3.p 207 ERELKRERRKQSNRESARRSRLRKQAETEELARKVDMLTAENVSLKSEIIQLTEGSEQMRMEN 269
                          89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165962.3E-2358186No hitNo description
Gene3DG3DSA:1.20.5.1707.0E-15203266No hitNo description
PfamPF001703.2E-21207269IPR004827Basic-leucine zipper domain
SMARTSM003385.4E-21207271IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.806209272IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-11210265No hitNo description
CDDcd147021.31E-17212260No hitNo description
PROSITE patternPS000360214229IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MMPPYGPPYA AFYSHGGVYT HPAVAIGPHL HGQGVSSSPA VGTHSSIESP TKLSGNTDQG  60
LMKKSKGFDG LAMSIGNCNA ESAEHGAENR QSQSVDTEGY SDGSDGNTAG ANQTKRKRCR  120
EGTLTTDGEG KTELQNGPAS KETSSSKKIV SATPASVAGT LVGPVVSSVM ATTLELRNPS  180
TVDSKANSTS APQPCAIVPN ETCLQNEREL KRERRKQSNR ESARRSRLRK QAETEELARK  240
VDMLTAENVS LKSEIIQLTE GSEQMRMENS ALREKLRNTQ LGQREEIILS SIESKRAAPV  300
STENLLSRVN NSSSNDRTTE NENDFCENKP NSGAKLHQLL DTNPRADAVA AG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1223229RRSRLRK
2223230RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.600430.0epicotyl| root| seed coat
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G060400.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311410.0KT031141.1 Glycine max clone HN_CCL_141 BZIP transcription factor (Glyma16g03190.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014633245.10.0transcriptional activator TAF-1 isoform X2
RefseqXP_028239451.10.0transcriptional activator TAF-1-like isoform X2
TrEMBLA0A0R0IZQ80.0A0A0R0IZQ8_SOYBN; Uncharacterized protein
STRINGGLYMA07G06620.20.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.16e-84G-box binding factor 3
Publications ? help Back to Top
  1. Liao Y, et al.
    Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis.
    Planta, 2008. 228(2): p. 225-40
    [PMID:18365246]