PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G079000.2.p
Common NameGLYMA_07G079000, LOC100801594
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ARR-B
Protein Properties Length: 458aa    MW: 51077.6 Da    PI: 5.7007
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G079000.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like33.31e-10190240252
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 
                          +rl Wt + H++F+  ve  G s +A P +  +l +v+gL+ ++vk HLQ+
  Glyma.07G079000.2.p 190 KRLSWTGDSHTKFLGGVEFSGTSGEAPPNQRHQLRNVPGLAKQNVKNHLQQ 240
                          79************************************************6 PP
2Response_reg27.31.9e-1023104182
                          EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTT CS
         Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahge 82 
                          vl+vd + + +  + ++l+  gy ev +a+ ++eal+++++k+   +l ll +++p+m+   l+++ire + +l+  ++ta+++
  Glyma.07G079000.2.p  23 VLVVDNNLTCLATVLKILQTLGY-EVVTASLASEALAIIEKKKdeLNLALLEVDLPDMKINSLTEKIREIS-DLQYFLMTANDN 104
                          89*********************.***************888889************************98.999999999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521722.42E-1519130IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23007.7E-1620128No hitNo description
PROSITE profilePS5011016.72122131IPR001789Signal transduction response regulator, receiver domain
PfamPF000727.2E-723104IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.53E-924120No hitNo description
Gene3DG3DSA:1.10.10.601.5E-7188240IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-7190240IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0005622Cellular Componentintracellular
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MDSDNFQSVD LRKYICPVPG IQVLVVDNNL TCLATVLKIL QTLGYEVVTA SLASEALAII  60
EKKKDELNLA LLEVDLPDMK INSLTEKIRE ISDLQYFLMT ANDNPLCNGS KRYFKKPVTI  120
YDLSSLWMYL KWKIEDGSIV TEDVRSYVNN NQEFQPFLNA RGQTLQIGKR KEQRHKIGGN  180
QSESLLLKRK RLSWTGDSHT KFLGGVEFSG TSGEAPPNQR HQLRNVPGLA KQNVKNHLQQ  240
SLQQANPIHQ HSNIHSSDLN LGSQYVSQTD NYNGKIHQLP NCHVKICNCM HLHSQRNPLY  300
ELSILSPSDQ TSTGQNQLYP PGELFGAAHY TSGSGEFMNN GNGKSGETCA ENTTDIKVFS  360
EDTHVYCVDD LAVQSEMDFS TLLANDMCQR FHPFLPVPLP PSDGKEHGIS GAEAGQIDEI  420
FYPPNGTQQF SDEDLNIWLS MVKSLNCSMV LLEAVEG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1168190KRKEQRHKIGGNQSESLLLKRKR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.452780.0stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G079000.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006583355.10.0two-component response regulator ARR2 isoform X1
RefseqXP_028239685.10.0two-component response regulator ARR2-like isoform X1
TrEMBLA0A445JTX30.0A0A445JTX3_GLYSO; Two-component response regulator ARR2 isoform A
TrEMBLI1KII40.0I1KII4_SOYBN; Uncharacterized protein
STRINGGLYMA07G08590.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-20response regulator 2