PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G099100.1.p
Common NameGLYMA_07G099100
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family BES1
Protein Properties Length: 179aa    MW: 19784.8 Da    PI: 10.3849
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G099100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822161.74.9e-50591187
               DUF822  1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssas 87
                         g++gr ptwkErEnnkrRERr Raiaakiy+GLRaqGnykl k++DnneV+kALc+e Gw+ve+DGttyrkg+k+++++e+ g+ ++
  Glyma.07G099100.1.p  5 GSTGRLPTWKERENNKRRERRQRAIAAKIYTGLRAQGNYKLLKHCDNNEVVKALCAEVGWIVEEDGTTYRKGCKRPSASEIEGTTTN 91
                         5899************************************************************************99999998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056879.7E-46790IPR008540BES1/BZR1 plant transcription factor, N-terminal
SMARTSM011631.9E-1273127IPR014811Argonaute, linker 1 domain
PfamPF086992.4E-1388125IPR014811Argonaute, linker 1 domain
SuperFamilySSF1016901.92E-999161IPR003100PAZ domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MTGGGSTGRL PTWKERENNK RRERRQRAIA AKIYTGLRAQ GNYKLLKHCD NNEVVKALCA  60
EVGWIVEEDG TTYRKGCKRP SASEIEGTTT NIRGGVIGCR GFHSSFRTTQ SGLSLNIDVS  120
TTMIITPGPV VDFLISNQNV RDPFSLDWAK AKRTLKNLMH LKVAIMVLNQ CYIIVGSL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-27990372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-27990372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-27990372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-27990372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.553221e-131cotyledon| epicotyl| hypocotyl| leaf| meristem| root| seed coat| somatic embryo| stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G099100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2354171e-108AC235417.1 Glycine max strain Williams 82 clone GM_WBb0135A07, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006583443.11e-130protein argonaute 4
TrEMBLK7L0R71e-129K7L0R7_SOYBN; Uncharacterized protein
STRINGGLYMA07G11105.11e-130(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2656023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36780.19e-29BES1/BZR1 homolog 2